RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GADD45GO95257 159 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 GBAP04062 536 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ITGA2P17301 1181 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CD22P20273 847 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 PFN3P60673 137 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 SCARB2Q14108 478 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CDKN3Q16667 212 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 GCNT6Q5T4J0 391 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 LIPJQ5W064 366 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ADNP2Q6IQ32 1131 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 THOC6Q86W42 341 aaKnown RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 KRT73Q86Y46 540 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 SLC34A3Q8N130 599 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CBARPQ8N350 705 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 DCAF4L2Q8NA75 395 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 AQP11Q8NBQ7 271 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 PHOX2BQ99453 314 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 SPATA9Q9BWV2 254 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CFAP97Q9P2B7 532 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 MUTYHQ9UIF7 546 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 BTNL2Q9UIR0 455 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 RAB23Q9ULC3 237 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 HCN4Q9Y3Q4 1203 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 E9PQ18 207 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 H3BQ06 376 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 IGSF6O95976 241 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 GABRB1P18505 474 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 PTX3P26022 381 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CNR2P34972 360 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 RPS19P39019 145 aaKnown RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 HNF4AP41235 474 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ASMTP46597 345 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 RAB33AQ14088 237 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 TBRG1Q3YBR2 411 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 SLC44A2Q8IWA5 706 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 FAM217AQ8IXS0 508 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CPA6Q8N4T0 437 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF366Q8N895 744 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 MRPL43Q8N983 215 aaKnown RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 GPR151Q8TDV0 419 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 C2orf15Q8WU43 125 aaKnown RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 TMEM246Q9BRR3 403 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 TTYH2Q9BSA4 534 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 SLC46A2Q9BY10 475 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF282Q9UDV7 671 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 TBC1D24Q9ULP9 559 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 KLHL20Q9Y2M5 609 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 OR51B4Q9Y5P0 310 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 TMEM229AB2RXF0 380 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 HOXC11O43248 304 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ETHE1O95571 254 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 EFEMP2O95967 443 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CHI3L1P36222 383 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 SOX3P41225 446 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 VIPR2P41587 438 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 HTRA4P83105 476 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-208ENST00000527323 MXD1Q05195 221 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 MADCAM1Q13477 382 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 IRF3Q14653 427 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ZMAT1Q5H9K5 638 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 DGKKQ5KSL6 1271 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 PLAG1Q6DJT9 500 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 OR5AK3PQ8NH89 298 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 OR2A14Q96R47 310 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 SLC35A5Q9BS91 424 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 C11orf16Q9NQ32 467 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 ACSL6Q9UKU0 697 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 BACE2Q9Y5Z0 518 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CHD5Q8TDI0 1954 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 C1orf226A1L170 272 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 LINC01565O15544 149 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 IDSP22304 550 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 AP1S2P56377 157 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.96□□□□□ -0.49
CAPN1-208ENST00000527323 GPM6BQ13491 265 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 POM121L1PQ3SYA9 428 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 TPRG1Q6ZUI0 275 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 GPR155Q7Z3F1 870 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 OR4C15Q8NGM1 316 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 CLP1Q92989 425 aaKnown RBP11.96□□□□□ -0.49
CAPN1-208ENST00000527323 MAGEB10Q96LZ2 347 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-208ENST00000527323 SNX18Q96RF0 628 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 BRD9Q9H8M2 597 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 IL21Q9HBE4 155 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 NPAP1Q9NZP6 1156 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 GRIP1Q9Y3R0 1128 aa11.96□□□□□ -0.49
CAPN1-208ENST00000527323 C6orf47O95873 294 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 ATP1B2P14415 290 aaPredicted RBP11.96□□□□□ -0.5
CAPN1-208ENST00000527323 SOAT1P35610 550 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 ETV6P41212 452 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 MAPK8P45983 427 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 RORCP51449 518 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 SSX1Q16384 188 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.5
CAPN1-208ENST00000527323 UBE2J2Q8N2K1 259 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 CHAC2Q8WUX2 184 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 CDCA4Q9BXL8 241 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 MMP28Q9H239 520 aa11.96□□□□□ -0.5
CAPN1-208ENST00000527323 CHST8Q9H2A9 424 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms