RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CROTQ9UKG9 612 aa12.96□□□□□ -0.33
CD44-224ENST00000526669 ADAM21Q9UKJ8 722 aa12.96□□□□□ -0.33
CD44-224ENST00000526669 PADI1Q9ULC6 663 aa12.96□□□□□ -0.33
CD44-224ENST00000526669 DAPP1Q9UN19 280 aa12.96□□□□□ -0.33
CD44-224ENST00000526669 FRYQ5TBA9 3013 aa12.96□□□□□ -0.34
CD44-224ENST00000526669 GMNCA6NCL1 334 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 OR2W5A6NFC9 320 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 C9J4A7 227 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 E9PBE3 544 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 NPIPB8E9PQR5 432 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 TLX3O43711 291 aaPredicted RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 KLHL41O60662 606 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 B4GALT2O60909 372 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 CDC123O75794 336 aaPredicted RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 IL3P08700 152 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 ALDOCP09972 364 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 FAM58BPP0C7Q3 252 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 PRR35P0CG20 571 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 PIM1P11309 404 aaPredicted RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 RNH1P13489 461 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 LBPP18428 481 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 SDC1P18827 310 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 TCN2P20062 427 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 DRD4P21917 467 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 CPN2P22792 545 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 TACR1P25103 407 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 CD82P27701 267 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 HNRNPFP52597 415 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 RPS18P62269 152 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 SRSF6Q13247 344 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 LSM12Q3MHD2 195 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 IL23RQ5VWK5 629 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 TMEM198Q66K66 360 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 C18orf63Q68DL7 685 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 MRM1Q6IN84 353 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 ACAD11Q709F0 780 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 LARP4Q71RC2 724 aaKnown RBP eCLIP12.95□□□□□ -0.34
CD44-224ENST00000526669 VASH2Q86V25 355 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 ZC3H7AQ8IWR0 971 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 ZCCHC7Q8N3Z6 543 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 LIX1Q8N485 282 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 IL22RA1Q8N6P7 574 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 ENDOVQ8N8Q3 282 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 TMEM52Q8NDY8 209 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 C16orf78Q8WTQ4 265 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 NKD1Q969G9 470 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 GFM2Q969S9 779 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 MAELQ96JY0 434 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 TSSK3Q96PN8 268 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 NPLQ9BXD5 320 aaPredicted RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 SOX17Q9H6I2 414 aaPredicted RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 LYARQ9NX58 379 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 BAIAP2L1Q9UHR4 511 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 ADAM29Q9UKF5 820 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 MAP4K5Q9Y4K4 846 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 ATG4BQ9Y4P1 393 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 ASB4Q9Y574 426 aa12.95□□□□□ -0.34
CD44-224ENST00000526669 MRPS18BQ9Y676 258 aaKnown RBP12.95□□□□□ -0.34
CD44-224ENST00000526669 MYOCOSA0A1B0GUC4 107 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 GLOD5A6NK44 160 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 PSMD12O00232 456 aaPredicted RBP12.94□□□□□ -0.34
CD44-224ENST00000526669 VPS4BO75351 444 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 LRATO95237 230 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 TGDSO95455 350 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 AIFM1O95831 613 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 LIPCP11150 499 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 BCKDHAP12694 445 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 F8A1P23610 371 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 DLSTP36957 453 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 STAT5AP42229 794 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 TSFMP43897 325 aaKnown RBP12.94□□□□□ -0.34
CD44-224ENST00000526669 ALDH9A1P49189 494 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 ARFIP1P53367 373 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 DIO3P55073 304 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 NME5P56597 212 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 TAS2R50P59544 299 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 ERVK-8P63133 956 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 MC1RQ01726 317 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 TNFRSF17Q02223 184 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 OCA2Q04671 838 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 ZNF763Q0D2J5 394 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 DNASE1L3Q13609 305 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 MAP7Q14244 749 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 NKG7Q16617 165 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 NIPAL1Q6NVV3 410 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 OVCH1Q7RTY7 1134 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 GPR180Q86V85 440 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 DTX1Q86Y01 620 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 STT3BQ8TCJ2 826 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 GATA6Q92908 595 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 TM4SF18Q96CE8 201 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 C11orf24Q96F05 449 aaPredicted RBP12.94□□□□□ -0.34
CD44-224ENST00000526669 EGLN2Q96KS0 407 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 FCRL1Q96LA6 429 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 CATSPER2Q96P56 530 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 ELAC2Q9BQ52 826 aaKnown RBP12.94□□□□□ -0.34
CD44-224ENST00000526669 DPH2Q9BQC3 489 aaPredicted RBP12.94□□□□□ -0.34
CD44-224ENST00000526669 NSRP1Q9H0G5 558 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms