RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 METTL4Q8N3J2 472 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 ZCCHC7Q8N3Z6 543 aaKnown RBP12.19□□□□□ -0.46
SMPD1-202ENST00000526280 MGARPQ8TDB4 240 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 CATSPER2Q96P56 530 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 IP6K3Q96PC2 410 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 MRPL1Q9BYD6 325 aaKnown RBP12.19□□□□□ -0.46
SMPD1-202ENST00000526280 ACPTQ9BZG2 426 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 VN1R1Q9GZP7 353 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 DDX31Q9H8H2 851 aaKnown RBP12.19□□□□□ -0.46
SMPD1-202ENST00000526280 LYRM4Q9HD34 91 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 NMRK1Q9NWW6 199 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 AHSPQ9NZD4 102 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 VPS29Q9UBQ0 182 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 DAPP1Q9UN19 280 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 POLHQ9Y253 713 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 TRAF6Q9Y4K3 522 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 SCN2AQ99250 2005 aa12.19□□□□□ -0.46
SMPD1-202ENST00000526280 A0A0A6YYD5 115 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 OR2W5A6NFC9 320 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 TMEM114B3SHH9 223 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 FAM227AF5H4B4 570 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 PSMD12O00232 456 aaPredicted RBP12.18□□□□□ -0.46
SMPD1-202ENST00000526280 CYR61O00622 381 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 ITM2AO43736 263 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 EEDO75530 441 aaKnown RBP12.18□□□□□ -0.46
SMPD1-202ENST00000526280 HEXBP07686 556 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 NEFHP12036 1026 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 BGNP21810 368 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 JAK1P23458 1154 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
SMPD1-202ENST00000526280 RAB38P57729 211 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 ABCE1P61221 599 aaKnown RBP12.18□□□□□ -0.46
SMPD1-202ENST00000526280 PPP2R2AP63151 447 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 RHAGQ02094 409 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 TBL3Q12788 808 aaKnown RBP12.18□□□□□ -0.46
SMPD1-202ENST00000526280 SLAMF1Q13291 335 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 DEFB109BQ30KR1 87 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 UGT3A2Q3SY77 523 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 MINDY4Q4G0A6 757 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 KANK2Q63ZY3 851 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 SCIMPQ6UWF3 145 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 RNF165Q6ZSG1 346 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 MRGPREQ86SM8 312 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 CLYBLQ8N0X4 340 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 ADAMTS18Q8TE60 1221 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 MAPKAP1Q9BPZ7 522 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 RBCK1Q9BYM8 510 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 ZNF395Q9H8N7 513 aaPredicted RBP12.18□□□□□ -0.46
SMPD1-202ENST00000526280 ZDHHC2Q9UIJ5 367 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 ADAM29Q9UKF5 820 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 DNAJC15Q9Y5T4 150 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 HS3ST3B1Q9Y662 390 aa12.18□□□□□ -0.46
SMPD1-202ENST00000526280 TMEM233B4DJY2 109 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 SOCS6O14544 535 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 PCDH17O14917 1159 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 B4GALT2O60909 372 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 ALOX12BO75342 701 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 LYPLA1O75608 230 aaPredicted RBP12.17□□□□□ -0.46
SMPD1-202ENST00000526280 CDC123O75794 336 aaPredicted RBP12.17□□□□□ -0.46
SMPD1-202ENST00000526280 SNUPNO95149 360 aaKnown RBP12.17□□□□□ -0.46
SMPD1-202ENST00000526280 HSPA4LO95757 839 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 ITGB2P05107 769 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 SLC1A6P48664 564 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 HMGCS1Q01581 520 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 STX3Q13277 289 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 ATP1A4Q13733 1029 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 SH2D4BQ5SQS7 431 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 MFSD4BQ5TF39 518 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 MRM1Q6IN84 353 aaKnown RBP12.17□□□□□ -0.46
SMPD1-202ENST00000526280 TMEM205Q6UW68 189 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 KIRREL2Q6UWL6 708 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 PAGE2Q7Z2X7 111 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 COMMD6Q7Z4G1 85 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 GPR180Q86V85 440 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 NUDT13Q86X67 352 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 PLPP5Q8NEB5 264 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 CHTF18Q8WVB6 975 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 MESP1Q9BRJ9 268 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 C20orf27Q9GZN8 174 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 TUBB1Q9H4B7 451 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 P4HTMQ9NXG6 502 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 MS4A12Q9NXJ0 267 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 FBXW2Q9UKT8 454 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 MAN2B2Q9Y2E5 1009 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.17□□□□□ -0.46
SMPD1-202ENST00000526280 ASB4Q9Y574 426 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 CACNA1GO43497 2377 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
SMPD1-202ENST00000526280 NUP210LQ5VU65 1888 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 PCSK5Q92824 1860 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 LOC102723996A0A087X1L8 192 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 PEX12O00623 359 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 PROM1O43490 865 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 TMPRSS11DO60235 418 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 PRMT3O60678 531 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 CHEK2O96017 543 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 GBAP04062 536 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 KLK1P06870 262 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 FAM58BPP0C7Q3 252 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms