RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MYL7Q01449 175 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 GCNT1Q02742 428 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 PPARDQ03181 441 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 ARHGAP1Q07960 439 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 TRAP1Q12931 704 aaKnown RBP3.43□□□□□ -1.86
CD44-219ENST00000525685 ITGA9Q13797 1035 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 TEAD2Q15562 447 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 NPTX1Q15818 432 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 STXBP2Q15833 593 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 TMEM30BQ3MIR4 351 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 SPECC1Q5M775 1068 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 ADAM5Q6NVV9 412 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 TMEM207Q6UWW9 146 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 DNAJB7Q7Z6W7 309 aaPredicted RBP3.43□□□□□ -1.86
CD44-219ENST00000525685 PHLDB2Q86SQ0 1253 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 LSMEM2Q8N112 164 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 MARVELD2Q8N4S9 558 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 RASGEF1AQ8N9B8 481 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 CRYGNQ8WXF5 182 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 ANP32BQ92688 251 aaKnown RBP3.43□□□□□ -1.86
CD44-219ENST00000525685 TRIM44Q96DX7 344 aaPredicted RBP3.43□□□□□ -1.86
CD44-219ENST00000525685 LRRC3BQ96PB8 259 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 LLPHQ9BRT6 129 aaKnown RBP3.43□□□□□ -1.86
CD44-219ENST00000525685 GLT8D2Q9H1C3 349 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 WDR13Q9H1Z4 485 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 FZD8Q9H461 694 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 TLE6Q9H808 572 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 RNF121Q9H920 327 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 C6orf50Q9HD87 102 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 SH3GLB2Q9NR46 395 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 EPHA6Q9UF33 1036 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 UBIAD1Q9Y5Z9 338 aa3.43□□□□□ -1.86
CD44-219ENST00000525685 MYH7BA7E2Y1 1941 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 IGLV3-22A0A075B6J6 115 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 A0A087WW49 117 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 TRAV24A0A0B4J272 114 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 FAM86B1E9PN63 330 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 SLCO1B7G3V0H7 640 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 ZG16O60844 167 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 ATP9AO75110 1047 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GLRA3O75311 464 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 STAM2O75886 525 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CDK2AP2O75956 126 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 AP2A2O94973 939 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GH1P01241 217 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 IGLV1-44P01699 117 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 APOHP02749 345 aaPredicted RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 MMP1P03956 469 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 RAF1P04049 648 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 ASGR1P07306 291 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 VIMP08670 466 aaKnown RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 FAM86B2P0C5J1 330 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CFC1BP0CG36 223 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CFC1P0CG37 223 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CAPN2P17655 700 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 EPORP19235 508 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CALRP27797 417 aaKnown RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 SFTPDP35247 375 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 KRT2P35908 639 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GP5P40197 560 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 ACLYP53396 1101 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 MTCP1P56278 107 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GSDMDP57764 484 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 HMGN5P82970 282 aaKnown RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 PMP22Q01453 160 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 E2F5Q15329 346 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 LRRC26Q2I0M4 334 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CTU2Q2VPK5 515 aaKnown RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 ZFP69Q49AA0 526 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CEP55Q53EZ4 464 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 XKR3Q5GH77 459 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 SLC25A53Q5H9E4 307 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CEP85LQ5SZL2 805 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GALNT17Q6IS24 598 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 PWWP2BQ6NUJ5 590 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 IL27RAQ6UWB1 636 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 HOGA1Q86XE5 327 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 CROCCP3Q8IVE0 287 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 FAM219AQ8IW50 185 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 BLIDQ8IZY5 108 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 BMPERQ8N8U9 685 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 ADAD2Q8NCV1 583 aaKnown RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 OR7A2PQ8NGA2 310 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 OR2T11Q8NH01 316 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 SLC26A7Q8TE54 656 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 TBCKQ8TEA7 893 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 DYRK2Q92630 601 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 NSMAFQ92636 917 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 EXOC4Q96A65 974 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 WBP1Q96G27 269 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GMPPAQ96IJ6 420 aaPredicted RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 C8orf76Q96K31 380 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 NECTIN4Q96NY8 510 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 NKX3-1Q99801 234 aaPredicted RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 CITED2Q99967 270 aaPredicted RBP3.42□□□□□ -1.86
CD44-219ENST00000525685 DGCR6LQ9BY27 220 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 DNAJC4Q9NNZ3 241 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 PKD2L2Q9NZM6 624 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GMEB2Q9UKD1 530 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms