RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	SDC1	P18827	310 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	DGKA	P23743	735 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PSMB9	P28065	219 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	S100A3	P33764	101 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GGT5	P36269	586 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	WAS	P42768	502 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PIK3CG	P48736	1102 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	DGKG	P49619	791 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ST13	P50502	369 aa	Known RBP	7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SGSH	P51688	502 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	WNT3	P56703	355 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	TUBA1B	P68363	451 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	VLDLR	P98155	873 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	IFITM2	Q01629	132 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SRSF11	Q05519	484 aa	Known RBP	7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PRKCD	Q05655	676 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	LMAN2	Q12907	356 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PTPRR	Q15256	657 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	CDKN3	Q16667	212 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	VMAC	Q2NL98	169 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GPRC6A	Q5T6X5	926 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ZNF783	Q6ZMS7	281 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	TUBA1A	Q71U36	451 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ARMCX6	Q7L4S7	300 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	LRRC70	Q7Z2Q7	622 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	GALNT5	Q7Z7M9	940 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SERPINA9	Q86WD7	417 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SYT12	Q8IV01	421 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ENTHD1	Q8IYW4	607 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	FAM9C	Q8IZT9	166 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	RBFA	Q8N0V3	343 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	CFAP52	Q8N1V2	620 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	L3MBTL4	Q8NA19	623 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	CHTF18	Q8WVB6	975 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	LGALS12	Q96DT0	336 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	CMTM7	Q96FZ5	175 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	HRASLS5	Q96KN8	279 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	EXOC2	Q96KP1	924 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	EPYC	Q99645	322 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SPATA9	Q9BWV2	254 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ADGRE3	Q9BY15	652 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ITPA	Q9BY32	194 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ASPSCR1	Q9BZE9	553 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	DCSTAMP	Q9H295	470 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	RIBC2	Q9H4K1	309 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	EPS8L2	Q9H6S3	715 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	LIN7B	Q9HAP6	207 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SARS2	Q9NP81	518 aa	Known RBP	7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PCDH12	Q9NPG4	1184 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	TMEM9B	Q9NQ34	198 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SACM1L	Q9NTJ5	587 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	TMEM74B	Q9NUR3	256 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	WWOX	Q9NZC7	414 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	PSORS1C1	Q9UIG5	152 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	ZNF490	Q9ULM2	529 aa	Predicted RBP	7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	SLC6A14	Q9UN76	642 aa		7.5	□□□□□ -1.21
SPIDR-223	ENST00000524033	CHD8	Q9HCK8	2581 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	HELZ	P42694	1942 aa	Known RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033		A0A1B0GVM2	712 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	AGAP14	A8MT82	685 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	WASH3P	C4AMC7	463 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	EIF3F	O00303	357 aa	Predicted RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CDX4	O14627	284 aa	Predicted RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	PCDHGA12	O60330	932 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	ZNF217	O75362	1048 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	ULK1	O75385	1050 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	OXSR1	O95747	527 aa	Predicted RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	B3GALT4	O96024	378 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	PDYN	P01213	254 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	KRT6A	P02538	564 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	C9	P02748	559 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	KRT6B	P04259	564 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	FABP3	P05413	133 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CBSL	P0DN79	551 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	MYCLP1	P12525	358 aa	Predicted RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	SPN	P16150	400 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CD36	P16671	472 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	ZNF7	P17097	686 aa	Predicted RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	GABRG2	P18507	467 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	ITPKA	P23677	461 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	ACRV1	P26436	265 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	EPHA2	P29317	976 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CORO1A	P31146	461 aa	Known RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	GRK5	P34947	590 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CBS	P35520	551 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	HMGCL	P35914	325 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	GGT2	P36268	569 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	TGFBR1	P36897	503 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	LIPA	P38571	399 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CASP3	P42574	277 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CTSK	P43235	329 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	SLC6A12	P48065	614 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	GSS	P48637	474 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	KRT6C	P48668	564 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	CRYBA2	P53672	197 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	TPTE	P56180	551 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	RPS24	P62847	133 aa	Known RBP	7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	DAB2	P98082	770 aa		7.49	□□□□□ -1.21
SPIDR-223	ENST00000524033	RPL6	Q02878	288 aa	Known RBP	7.49	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms