RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ERVK-6Q9BXR3 956 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 ILKAPQ9H0C8 392 aaPredicted RBP19.37■□□□□ 0.69
TRIM35-203ENST00000521253 LYRM4Q9HD34 91 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 PRTFDC1Q9NRG1 225 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 DCDC2Q9UHG0 476 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 PLAAQ9Y263 795 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 CNTRLQ7Z7A1 2325 aa19.37■□□□□ 0.69
TRIM35-203ENST00000521253 PLPP1O14494 284 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 CDH16O75309 829 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 ETHE1O95571 254 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 UQCRHP07919 91 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 TSPAN8P19075 237 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 ATP5F1P24539 256 aaPredicted RBP19.36■□□□□ 0.69
TRIM35-203ENST00000521253 PTX3P26022 381 aaPredicted RBP19.36■□□□□ 0.69
TRIM35-203ENST00000521253 RAP1GDS1P52306 607 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 HSD17B7P56937 341 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 SLC26A5P58743 744 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 RCN2Q14257 317 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 ERCC6LQ2NKX8 1250 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 PRR30Q53SZ7 412 aaPredicted RBP19.36■□□□□ 0.69
TRIM35-203ENST00000521253 OR4C11Q6IEV9 310 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 EMBQ6PCB8 327 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 MILR1Q7Z6M3 343 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 CUZD1Q86UP6 607 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 ZNF595Q8IYB9 648 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 OR4F6Q8NGB9 312 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 DNAJB14Q8TBM8 379 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 MIB2Q96AX9 1013 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 RGMAQ96B86 450 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 MAGEB10Q96LZ2 347 aaPredicted RBP19.36■□□□□ 0.69
TRIM35-203ENST00000521253 TMEM237Q96Q45 408 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 CENPKQ9BS16 269 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 MMP25Q9NPA2 562 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 EMCNQ9ULC0 261 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 MRPS33Q9Y291 106 aaKnown RBP19.36■□□□□ 0.69
TRIM35-203ENST00000521253 CLDN16Q9Y5I7 305 aa19.36■□□□□ 0.69
TRIM35-203ENST00000521253 TGFBR3LH3BV60 316 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 FOXE1O00358 373 aaPredicted RBP19.35■□□□□ 0.69
TRIM35-203ENST00000521253 CLDN4O14493 209 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 GLRA3O75311 464 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 OTCP00480 354 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 NUDT17P0C025 328 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 SLC13A2Q13183 592 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 GGTA1PQ4G0N0 100 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 UNC50Q53HI1 259 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 ZNF678Q5SXM1 525 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 FRG2Q64ET8 278 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 LETMD1Q6P1Q0 360 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 CPT1CQ8TCG5 803 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 TRPC4APQ8TEL6 797 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 MTFMTQ96DP5 389 aaKnown RBP19.35■□□□□ 0.69
TRIM35-203ENST00000521253 CNDP1Q96KN2 507 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 FRG2BQ96QU4 278 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 ZNF717Q9BY31 904 aaPredicted RBP19.35■□□□□ 0.69
TRIM35-203ENST00000521253 PSD3Q9NYI0 1048 aa19.35■□□□□ 0.69
TRIM35-203ENST00000521253 RELNP78509 3460 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 SAGE2PA6NJ88 616 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 A8MUA0 341 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 A8MUI8 341 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 SUPT7LO94864 414 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 TSFMP43897 325 aaKnown RBP19.34■□□□□ 0.69
TRIM35-203ENST00000521253 PRKAA2P54646 552 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 ARG2P78540 354 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 CLCQ05315 142 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 SLAMF1Q13291 335 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 CUL3Q13618 768 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 INPP5JQ15735 1006 aaPredicted RBP19.34■□□□□ 0.69
TRIM35-203ENST00000521253 TTC19Q6DKK2 380 aaPredicted RBP19.34■□□□□ 0.69
TRIM35-203ENST00000521253 CLNKQ7Z7G1 428 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 SLC22A9Q8IVM8 553 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 CAVIN3Q969G5 261 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 KCNK13Q9HB14 408 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 PLA2G3Q9NZ20 509 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 ZNF225Q9UK10 706 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 PPT2Q9UMR5 302 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 PCDHGA10Q9Y5H3 936 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 SCN2AQ99250 2005 aa19.34■□□□□ 0.69
TRIM35-203ENST00000521253 TLDC2A0PJX2 215 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 DYTNA2CJ06 578 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 KRT4P19013 534 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 IMPDH1P20839 514 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 PPP2R1BP30154 601 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 ARFIP1P53367 373 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 ZNF33BQ06732 778 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 IFT88Q13099 833 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 TLR1Q15399 786 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 ABHD17BQ5VST6 288 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 FAM219BQ5XKK7 198 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 FCRLBQ6BAA4 426 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 H3F3CQ6NXT2 135 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 IQCKQ8N0W5 287 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 ZCCHC7Q8N3Z6 543 aaKnown RBP19.33■□□□□ 0.68
TRIM35-203ENST00000521253 CATSPER1Q8NEC5 780 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 NFAM1Q8NET5 270 aaPredicted RBP19.33■□□□□ 0.68
TRIM35-203ENST00000521253 SERPINI1Q99574 410 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 PARD6BQ9BYG5 372 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 PNO1Q9NRX1 252 aaKnown RBP19.33■□□□□ 0.68
TRIM35-203ENST00000521253 STMN3Q9NZ72 180 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 TEKT2Q9UIF3 430 aa19.33■□□□□ 0.68
TRIM35-203ENST00000521253 FBXW2Q9UKT8 454 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms