RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 HPCAL4Q9UM19 191 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 PLA2G4CQ9UP65 541 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 MRPS2Q9Y399 296 aaKnown RBP3.61□□□□□ -1.83
SQLE-204ENST00000520493 KDRP35968 1356 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 GREB1LQ9C091 1923 aaPredicted RBP3.6□□□□□ -1.83
SQLE-204ENST00000520493 FAM230AA0A1W2PPH8 454 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 H0YCG3 227 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 EPHB6O15197 1021 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ACSL4O60488 711 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 SPAG6O75602 509 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 SNX4O95219 450 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 THRBP10828 461 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 PRG2P13727 222 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 MARCKSP29966 332 aaPredicted RBP3.6□□□□□ -1.83
SQLE-204ENST00000520493 AKT2P31751 481 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 MAGEA11P43364 429 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 PITPNBP48739 271 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 NR0B1P51843 470 aaKnown RBP3.6□□□□□ -1.83
SQLE-204ENST00000520493 GBX2P52951 348 aaPredicted RBP3.6□□□□□ -1.83
SQLE-204ENST00000520493 ACTR1AP61163 376 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 FKBP1BP68106 108 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 GABPB1Q06547 395 aaPredicted RBP3.6□□□□□ -1.83
SQLE-204ENST00000520493 SRSF9Q13242 221 aaKnown RBP eCLIP3.6□□□□□ -1.83
SQLE-204ENST00000520493 PDIA5Q14554 519 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 STX1AQ16623 288 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ZNF876PQ49A33 203 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 GPR33Q49SQ1 333 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 SPATA46Q5T0L3 261 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ARHGAP11AQ6P4F7 1023 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ARMCX2Q7L311 632 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 COX8CQ7Z4L0 72 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ZNF573Q86YE8 665 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 CROCCP3Q8IVE0 287 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 GPC2Q8N158 579 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 GBP7Q8N8V2 638 aaPredicted RBP3.6□□□□□ -1.83
SQLE-204ENST00000520493 MINDY2Q8NBR6 621 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ZNF248Q8NDW4 579 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 KLHDC9Q8NEP7 349 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 OR7A2PQ8NGA2 310 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 OR4A16Q8NH70 328 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 TM9SF4Q92544 642 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 PCDHB18PQ96TA0 734 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 PIGQQ9BRB3 760 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ERP44Q9BS26 406 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 FICDQ9BVA6 458 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 RAB9BQ9NP90 201 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ACOXLQ9NUZ1 547 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ATAD3AQ9NVI7 634 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 OR6C2Q9NZP2 312 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 FAM153AQ9UHL3 310 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 LAMP5Q9UJQ1 280 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 PRDM4Q9UKN5 801 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ERVK-19Q9WJR5 959 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 ENTPD4Q9Y227 616 aa3.6□□□□□ -1.83
SQLE-204ENST00000520493 MYH14Q7Z406 1995 aaKnown RBP3.6□□□□□ -1.83
SQLE-204ENST00000520493 BLOC1S5-TXNDC5H3BN57 136 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 E2F3O00716 465 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 SLC22A2O15244 555 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 RALAP11233 206 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 LHCGRP22888 699 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 FCARP24071 287 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 RBMS1P29558 406 aaKnown RBP3.59□□□□□ -1.83
SQLE-204ENST00000520493 STIP1P31948 543 aaKnown RBP3.59□□□□□ -1.83
SQLE-204ENST00000520493 CEACAM8P31997 349 aaPredicted RBP3.59□□□□□ -1.83
SQLE-204ENST00000520493 DUTP33316 252 aaKnown RBP3.59□□□□□ -1.83
SQLE-204ENST00000520493 TNFSF10P50591 281 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 MTTPP55157 894 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 OVGP1Q12889 678 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 SGCGQ13326 291 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 SNX1Q13596 522 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 RAPSNQ13702 412 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 TEAD2Q15562 447 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 LRRC23Q53EV4 343 aaPredicted RBP3.59□□□□□ -1.83
SQLE-204ENST00000520493 XKR3Q5GH77 459 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 WDR38Q5JTN6 314 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 CDHR3Q6ZTQ4 885 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 CYP4V2Q6ZWL3 525 aaPredicted RBP3.59□□□□□ -1.83
SQLE-204ENST00000520493 RPAINQ86UA6 219 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 PIGZQ86VD9 579 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 TDHQ8IZJ6 230 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 KIRREL3Q8IZU9 778 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 RNF149Q8NC42 400 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 OR52B4Q8NGK2 314 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 FCAMRQ8WWV6 532 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 DYRK2Q92630 601 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 RFT1Q96AA3 541 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 LGALS12Q96DT0 336 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 TAAR6Q96RI8 345 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 CCDC3Q9BQI4 270 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 POLR1EQ9GZS1 481 aaKnown RBP3.59□□□□□ -1.83
SQLE-204ENST00000520493 SHARPINQ9H0F6 387 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 SIRPDQ9H106 197 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 C5orf66Q9H5L9 145 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 TMEM231Q9H6L2 316 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 VIPAS39Q9H9C1 493 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 PANK4Q9NVE7 773 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 TEKT2Q9UIF3 430 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 MGAT4BQ9UQ53 548 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 RIPK3Q9Y572 518 aa3.59□□□□□ -1.83
SQLE-204ENST00000520493 R4GN57 208 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms