RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CLCN4P51793 760 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ABRQ12979 859 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ANKDD1AQ495B1 522 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 IQCCQ4KMZ1 466 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 SPANXN4Q5MJ08 99 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF772Q68DY9 489 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 GALNT17Q6IS24 598 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ANGPTL8Q6UXH0 198 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 GDPGP1Q6ZNW5 385 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 OTOAQ7RTW8 1153 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 LRRC43Q8N309 656 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 Q8NBF4 154 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 SPC24Q8NBT2 197 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF606Q8WXB4 792 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 CNRIP1Q96F85 164 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ATXN7L3BQ96GX2 97 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 C18orf12Q96KH6 178 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 C16orf45Q96MC5 204 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 RASL10BQ96S79 203 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 VGLL1Q99990 258 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 LRRC61Q9BV99 259 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF350Q9GZX5 532 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 C2orf40Q9H1Z8 148 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 DPEP2Q9H4A9 486 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 NCOR1P1Q9H4R4 102 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 FNDC4Q9H6D8 234 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 SRD5A3Q9H8P0 318 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 DNAJC17Q9NVM6 304 aaKnown RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 TMEM161AQ9NX61 479 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 NCKAP1Q9Y2A7 1128 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 HBS1LQ9Y450 684 aaKnown RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ZFP37Q9Y6Q3 630 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 MYH14Q7Z406 1995 aaKnown RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 IGHV4-30-2A0A087WSY4 118 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 IGHV3-20A0A0C4DH32 117 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 CCDC169A6NNP5 214 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF732B4DXR9 585 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 G3V2L1 256 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ECE2O60344 883 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 CLN5O75503 358 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 PALMO75781 387 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 GRAP2O75791 330 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 SLC16A8O95907 504 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 TSPY4P0CV99 314 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 TSPY10P0CW01 314 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ITIH1P19827 911 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 IL4RP24394 825 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 STIP1P31948 543 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 SNU13P55769 128 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ST8SIA6P61647 398 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 YWHAHQ04917 246 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 FAM189A2Q15884 450 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 KBTBD12Q3ZCT8 623 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 FILIP1LQ4L180 1135 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ERCC6L2Q5T890 1561 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 PLPP4Q5VZY2 271 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 PM20D1Q6GTS8 502 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 FBXL22Q6P050 247 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 SLC27A4Q6P1M0 643 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 MTERF4Q7Z6M4 381 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ZC3H3Q8IXZ2 948 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 TBC1D21Q8IYX1 336 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 DND1Q8IYX4 353 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 TDHQ8IZJ6 230 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 CLYBLQ8N0X4 340 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 DENND6BQ8NEG7 585 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 OR52K2Q8NGK3 314 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 OR5M9Q8NGP3 310 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 RPLP0P6Q8NHW5 317 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 FIBINQ8TAL6 211 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 C11orf45Q8TAV5 145 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 CD99L2Q8TCZ2 262 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 VPS39Q96JC1 886 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 SLC45A3Q96JT2 553 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 TSGA13Q96PP4 275 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 GAL3ST4Q96RP7 486 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 HNRNPABQ99729 332 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 GPATCH1Q9BRR8 931 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 CCM2Q9BSQ5 444 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 TCHPQ9BT92 498 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 IDI2Q9BXS1 227 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 TRIM7Q9C029 511 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 PANK3Q9H999 370 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 VIPAS39Q9H9C1 493 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 VPS37BQ9H9H4 285 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 RAB9BQ9NP90 201 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 MRPL17Q9NRX2 175 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 NLGN3Q9NZ94 848 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 HECW2Q9P2P5 1572 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 DBF4Q9UBU7 674 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 KLK11Q9UBX7 282 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ZMAT5Q9UDW3 170 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 CAB39Q9Y376 341 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 MRPS18CQ9Y3D5 142 aaKnown RBP3.06□□□□□ -1.92
VPS13B-207ENST00000518569 ZHX2Q9Y6X8 837 aa3.06□□□□□ -1.92
VPS13B-207ENST00000518569 A4D1N5 150 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 FAM149AA5PLN7 773 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 SERINC4A6NH21 518 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 ASB14A6NK59 587 aa3.05□□□□□ -1.92
VPS13B-207ENST00000518569 M0R296 226 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms