RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 LYARQ9NX58 379 aaKnown RBP12.28□□□□□ -0.44
PABPC1-205ENST00000518196 SIRT5Q9NXA8 310 aa12.28□□□□□ -0.44
PABPC1-205ENST00000518196 HCN3Q9P1Z3 774 aa12.28□□□□□ -0.44
PABPC1-205ENST00000518196 TRPC4Q9UBN4 977 aa12.28□□□□□ -0.44
PABPC1-205ENST00000518196 ZNF282Q9UDV7 671 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-205ENST00000518196 CCL27Q9Y4X3 112 aa12.28□□□□□ -0.44
PABPC1-205ENST00000518196 PTGDR2Q9Y5Y4 395 aa12.28□□□□□ -0.44
PABPC1-205ENST00000518196 USH1CQ9Y6N9 552 aa12.28□□□□□ -0.44
PABPC1-205ENST00000518196 SPACA6W5XKT8 324 aa12.28□□□□□ -0.44
PABPC1-205ENST00000518196 CCDC88CQ9P219 2028 aa12.27□□□□□ -0.44
PABPC1-205ENST00000518196 PSMD12O00232 456 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 LSM1O15116 133 aaKnown RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 CHST10O43529 356 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 PEX11AO75192 247 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 GUCY1B2O75343 617 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 EEDO75530 441 aaKnown RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 TGDSO95455 350 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 RAB40ALP0C0E4 278 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 RNH1P13489 461 aaKnown RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 ITGAXP20702 1163 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 IL10P22301 178 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 STAT5AP42229 794 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 RAB38P57729 211 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 RPS15P62841 145 aaKnown RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 OLR1P78380 273 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 MAT1AQ00266 395 aaKnown RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 MAD2L1Q13257 205 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 RUNX2Q13950 521 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 TUBB8Q3ZCM7 444 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 GALNTL6Q49A17 601 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 LCN10Q6JVE6 187 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 FAM199XQ6PEV8 388 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 DTX1Q86Y01 620 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 CA13Q8N1Q1 262 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 AMER3Q8N944 861 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 OR2T11Q8NH01 316 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 ADAMTS18Q8TE60 1221 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 CT55Q8WUE5 264 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 GATA6Q92908 595 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 KIAA1143Q96AT1 154 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 PPP1R36Q96LQ0 422 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 C3orf30Q96M34 536 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 EFHD1Q9BUP0 239 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 SORBS1Q9BX66 1292 aaKnown RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 ZNF717Q9BY31 904 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 AKIRIN1Q9H9L7 192 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 LYRM4Q9HD34 91 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 SLC22A11Q9NSA0 550 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 MS4A12Q9NXJ0 267 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 PHF11Q9UIL8 331 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 MCM8Q9UJA3 840 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 FARSAQ9Y285 508 aaKnown RBP12.27□□□□□ -0.45
PABPC1-205ENST00000518196 TMED5Q9Y3A6 229 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 SCN2AQ99250 2005 aa12.27□□□□□ -0.45
PABPC1-205ENST00000518196 A0A0A6YYD5 115 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 ATP6AP2A0A1C7CYW4 349 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 GNG14A0A1W2PPG7 69 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 C21orf140B9A014 251 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 PCDH7O60245 1069 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 ATP6AP2O75787 350 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 JUNP05412 331 aaKnown RBP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 FAM58BPP0C7Q3 252 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 TROVE2P10155 538 aaKnown RBP eCLIP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 CPN2P22792 545 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 MAPK1P28482 360 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 TPP2P29144 1249 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 TLX1P31314 330 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 TIA1P31483 386 aaKnown RBP eCLIP12.26□□□□□ -0.451e-323■■■■□ 25.1
PABPC1-205ENST00000518196 DLSTP36957 453 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 XCR1P46094 333 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 MAPK12P53778 367 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 GYS2P54840 703 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 TRA2BP62995 288 aaKnown RBP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 RPL38P63173 70 aaKnown RBP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 SYT16Q17RD7 645 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 SMU1Q2TAY7 513 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 GALNT18Q6P9A2 607 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 FAM198BQ6UWH4 519 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 COX15Q7KZN9 410 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 ZNF248Q8NDW4 579 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 OR5T3Q8NGG3 340 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 KCNE4Q8WWG9 221 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 MIEF2Q96C03 454 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 PEX11GQ96HA9 241 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 OR1F2PQ96R84 312 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 MAPKAP1Q9BPZ7 522 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 GPR87Q9BY21 358 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 TRIM55Q9BYV6 548 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 SLC26A1Q9H2B4 701 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 C14orf105Q9NVL8 296 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 KCND3Q9UK17 655 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 CROTQ9UKG9 612 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 NXT1Q9UKK6 140 aaKnown RBP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 FBXW2Q9UKT8 454 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 DAPP1Q9UN19 280 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 MRPS33Q9Y291 106 aaKnown RBP12.26□□□□□ -0.45
PABPC1-205ENST00000518196 PADI2Q9Y2J8 665 aa12.26□□□□□ -0.45
PABPC1-205ENST00000518196 IGLV3-12A0A075B6K2 115 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms