RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	KCNE2	Q9Y6J6	123 aa		14.61	□□□□□ -0.07
LMNA-223	ENST00000515459	ACAN	P16112	2415 aa		14.61	□□□□□ -0.07
LMNA-223	ENST00000515459	ABCA4	P78363	2273 aa		14.61	□□□□□ -0.07
LMNA-223	ENST00000515459	AKAP6	Q13023	2319 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	ARHGAP21	Q5T5U3	1957 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	ABCA2	Q9BZC7	2435 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	SYNDIG1L	A6NDD5	238 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	SUSD5	O60279	629 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	AHSG	P02765	367 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	FOSL1	P15407	271 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	PGAM1	P18669	254 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	SAT1	P21673	171 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	ADH7	P40394	386 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	PEX19	P40855	299 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	KIR2DL3	P43628	341 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	MAN2A2	P49641	1150 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	RAB38	P57729	211 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	BMPR2	Q13873	1038 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	CRYM	Q14894	314 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	ELAVL1	Q15717	326 aa	Known RBP	14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	WLS	Q5T9L3	541 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	TTC27	Q6P3X3	843 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	HSDL2	Q6YN16	418 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	FAM47E	Q6ZV65	393 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	WDR53	Q7Z5U6	358 aa	Predicted RBP	14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	ZNF595	Q8IYB9	648 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	TMEM251	Q8N6I4	163 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	GOLM1	Q8NBJ4	401 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	GAL3ST3	Q96A11	431 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	SARAF	Q96BY9	339 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	ALPK1	Q96QP1	1244 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	GSX1	Q9H4S2	264 aa	Predicted RBP	14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	LDAH	Q9H6V9	325 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	RASSF1	Q9NS23	344 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	SLC22A14	Q9Y267	594 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	PLEKHA6	Q9Y2H5	1048 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459	CLCA3P	Q9Y6N3	262 aa		14.6	□□□□□ -0.07
LMNA-223	ENST00000515459		A0A088AWK7	358 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459		A0A0G2JN53	185 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	ATP6AP2	A0A1C7CYW4	349 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	FAM47E-STBD1	D6RA91	191 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	PROM1	O43490	865 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	ATP6AP2	O75787	350 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	IFNA16	P05015	189 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	CCDC175	P0C221	793 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	ZNF10	P21506	573 aa	Predicted RBP	14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	CXCR5	P32302	372 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	HNRNPF	P52597	415 aa	Known RBP	14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	HK2	P52789	917 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	CCZ1B	P86790	482 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	CCZ1	P86791	482 aa	Predicted RBP	14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	SLC10A1	Q14973	349 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	HYAL4	Q2M3T9	481 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	C1orf185	Q5T7R7	199 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	NAT8L	Q8N9F0	302 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	FAM47B	Q8NA70	645 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	TMEM52	Q8NDY8	209 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	GOT1L1	Q8NHS2	421 aa	Predicted RBP	14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	DAZL	Q92904	295 aa	Known RBP	14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	SCYL1	Q96KG9	808 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	SGCZ	Q96LD1	299 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	RBSN	Q9H1K0	784 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	DLL4	Q9NR61	685 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	SACM1L	Q9NTJ5	587 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	ALKBH4	Q9NXW9	302 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	B4GALT7	Q9UBV7	327 aa		14.59	□□□□□ -0.07
LMNA-223	ENST00000515459	MAP1A	P78559	2803 aa	Predicted RBP	14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	ERI3	O43414	337 aa	Known RBP	14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	B3GALT2	O43825	422 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	NRDC	O43847	1150 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	CELA3A	P09093	270 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	GABRA1	P14867	456 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	DNASE1L1	P49184	302 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	DGKQ	P52824	942 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	SNTB1	Q13884	538 aa	Known RBP	14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	SBSN	Q6UWP8	590 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	CLNK	Q7Z7G1	428 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	CNTN4	Q8IWV2	1026 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	KLHDC8A	Q8IYD2	350 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	MORN4	Q8NDC4	146 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	TTL	Q8NG68	377 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	SREK1	Q8WXA9	508 aa	Known RBP	14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	CCT6B	Q92526	530 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	MAGOHB	Q96A72	148 aa	Known RBP	14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	MS4A6E	Q96DS6	147 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	PWWP2A	Q96N64	755 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	EXO5	Q9H790	373 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	CRIM1	Q9NZV1	1036 aa		14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	RPH3A	Q9Y2J0	694 aa	Predicted RBP	14.58	□□□□□ -0.08
LMNA-223	ENST00000515459	LRIT2	A6NDA9	550 aa		14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	HCN1	O60741	890 aa		14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	H2AFY	O75367	372 aa	Known RBP	14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	TTC4	O95801	387 aa		14.57	□□□□□ -0.08
LMNA-223	ENST00000515459		P04436	131 aa		14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	UQCRC1	P31930	480 aa		14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	HNRNPH1	P31943	449 aa	Known RBP	14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	PGGT1B	P53609	377 aa		14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	RNF4	P78317	190 aa		14.57	□□□□□ -0.08
LMNA-223	ENST00000515459	ADAM8	P78325	824 aa		14.57	□□□□□ -0.08

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms