RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ZNF763Q0D2J5 394 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 TIPARPQ7Z3E1 657 aaKnown RBP19.83■□□□□ 0.77
LSM6-207ENST00000515311 SPATA21Q7Z572 469 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 GPR180Q86V85 440 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 NLGN4XQ8N0W4 816 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 NLGN4YQ8NFZ3 816 aaPredicted RBP19.83■□□□□ 0.77
LSM6-207ENST00000515311 OR51Q1Q8NH59 317 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 MR1Q95460 341 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 EBPLQ9BY08 206 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 FAM107BQ9H098 131 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 SLC26A1Q9H2B4 701 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 MKKSQ9NPJ1 570 aaPredicted RBP19.83■□□□□ 0.77
LSM6-207ENST00000515311 HCN3Q9P1Z3 774 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 IFT80Q9P2H3 777 aaPredicted RBP19.83■□□□□ 0.77
LSM6-207ENST00000515311 POLR3HQ9Y535 204 aaPredicted RBP19.83■□□□□ 0.77
LSM6-207ENST00000515311 ASB4Q9Y574 426 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 SPACA6W5XKT8 324 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 WDFY3Q8IZQ1 3526 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 IGLV3-12A0A075B6K2 115 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 TEX51A0A1B0GUA7 166 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 DNAJB6O75190 326 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 ALBP02768 609 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 PRPS2P11908 318 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 SDC1P18827 310 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 ARFIP2P53365 341 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 HNRNPH2P55795 449 aaKnown RBP19.82■□□□□ 0.76
LSM6-207ENST00000515311 RAB38P57729 211 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 IL23RQ5VWK5 629 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 IKBIPQ70UQ0 350 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 MED25Q71SY5 747 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 OVCH1Q7RTY7 1134 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 FAM9CQ8IZT9 166 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 OR1F2PQ96R84 312 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 MAPKAP1Q9BPZ7 522 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 ELAC2Q9BQ52 826 aaKnown RBP19.82■□□□□ 0.76
LSM6-207ENST00000515311 C1orf50Q9BV19 199 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 FAM117AQ9C073 453 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 TGIF2Q9GZN2 237 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 CHST8Q9H2A9 424 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 MYNNQ9NPC7 610 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 TRPC4Q9UBN4 977 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 ZNF282Q9UDV7 671 aaPredicted RBP19.82■□□□□ 0.76
LSM6-207ENST00000515311 CEP295Q9C0D2 2601 aa19.82■□□□□ 0.76
LSM6-207ENST00000515311 C9J4A7 227 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 SNX3O60493 162 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 RAD1O60671 282 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 FAM107AO95990 144 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 ASMTP46597 345 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 IRX1P78414 480 aaPredicted RBP19.81■□□□□ 0.76
LSM6-207ENST00000515311 MAT1AQ00266 395 aaKnown RBP19.81■□□□□ 0.76
LSM6-207ENST00000515311 TNFRSF17Q02223 184 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 SYT16Q17RD7 645 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 TBC1D25Q3MII6 688 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 FAM198BQ6UWH4 519 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 DTX1Q86Y01 620 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 LIX1Q8N485 282 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.81■□□□□ 0.76
LSM6-207ENST00000515311 C16orf78Q8WTQ4 265 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 C10orf82Q8WW14 230 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 TM4SF18Q96CE8 201 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 RILPQ96NA2 401 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 WDR54Q9H977 334 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 AKIRIN1Q9H9L7 192 aaPredicted RBP19.81■□□□□ 0.76
LSM6-207ENST00000515311 PRDM9Q9NQV7 894 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 AIG1Q9NVV5 245 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 ATG4BQ9Y4P1 393 aa19.81■□□□□ 0.76
LSM6-207ENST00000515311 BLACEA4D250 179 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 PSMD12O00232 456 aaPredicted RBP19.8■□□□□ 0.76
LSM6-207ENST00000515311 CYR61O00622 381 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 PROM1O43490 865 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 CD63P08962 238 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 ALDOCP09972 364 aaKnown RBP19.8■□□□□ 0.76
LSM6-207ENST00000515311 IDO1P14902 403 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 TACR1P25103 407 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 BUD31P41223 144 aaPredicted RBP19.8■□□□□ 0.76
LSM6-207ENST00000515311 STAT5AP42229 794 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 XCR1P46094 333 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 DIO3P55073 304 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 TAS2R50P59544 299 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 KLC1Q07866 573 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 METTL21CQ5VZV1 264 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 LCN10Q6JVE6 187 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 MRPL14Q6P1L8 145 aaKnown RBP19.8■□□□□ 0.76
LSM6-207ENST00000515311 PIGWQ7Z7B1 504 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 CLNKQ7Z7G1 428 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 EFCAB3Q8N7B9 438 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 TBC1D20Q96BZ9 403 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 PEX11GQ96HA9 241 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 CCT8L2Q96SF2 557 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 C14orf105Q9NVL8 296 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 TEX10Q9NXF1 929 aaPredicted RBP19.8■□□□□ 0.76
LSM6-207ENST00000515311 CTSFQ9UBX1 484 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 GPN3Q9UHW5 284 aaPredicted RBP19.8■□□□□ 0.76
LSM6-207ENST00000515311 NXT1Q9UKK6 140 aaKnown RBP19.8■□□□□ 0.76
LSM6-207ENST00000515311 FBXW2Q9UKT8 454 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 TRIM33Q9UPN9 1127 aa19.8■□□□□ 0.76
LSM6-207ENST00000515311 AHCTF1Q8WYP5 2266 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 A0A1W2PR48 441 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 E9PBE3 544 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 UBDO15205 165 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms