RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PFDN1O60925 122 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 WBP4O75554 376 aaKnown RBP14.16□□□□□ -0.14
NUP54-217ENST00000514987 CLEC3AO75596 197 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 MT-ND2P03891 347 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 OPN1SWP03999 348 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 IFNW1P05000 195 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 DRD2P14416 443 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 GRK3P35626 688 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 KRT20P35900 424 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 TRIM23P36406 574 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 FRKP42685 505 aaPredicted RBP14.16□□□□□ -0.14
NUP54-217ENST00000514987 CDH12P55289 794 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 ENPP2Q13822 863 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 CLCA4Q14CN2 919 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 MLC1Q15049 377 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 TMEM35AQ53FP2 167 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 AGBL4Q5VU57 503 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 VITQ6UXI7 678 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 GET4Q7L5D6 327 aaPredicted RBP14.16□□□□□ -0.14
NUP54-217ENST00000514987 UBE2Q1Q7Z7E8 422 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 P2RY8Q86VZ1 359 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 ENTHD1Q8IYW4 607 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 LGI4Q8N135 537 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 LMNTD1Q8N9Z9 388 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 ZNF784Q8NCA9 323 aaPredicted RBP14.16□□□□□ -0.14
NUP54-217ENST00000514987 RASSF5Q8WWW0 418 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 S100ZQ8WXG8 99 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 TANKQ92844 425 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 F2RL3Q96RI0 385 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 SIGLEC11Q96RL6 698 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 CDCA3Q99618 268 aaPredicted RBP14.16□□□□□ -0.14
NUP54-217ENST00000514987 MAPKAP1Q9BPZ7 522 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 MENTQ9BUN1 341 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 ZNF717Q9BY31 904 aaPredicted RBP14.16□□□□□ -0.14
NUP54-217ENST00000514987 CXorf36Q9H7Y0 433 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 TAS2R7Q9NYW3 318 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 ACSL6Q9UKU0 697 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 HCN4Q9Y3Q4 1203 aa14.16□□□□□ -0.14
NUP54-217ENST00000514987 TRBC2A0A5B9 178 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 TMEM247A6NEH6 219 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 TMX2-CTNND1H3BSU7 103 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 M0R3G1 203 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 PCDHGA12O60330 932 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 KDM1AO60341 852 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 MPZL2O60487 215 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 CCNB2O95067 398 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 GADD45GO95257 159 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 MYOGP15173 224 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 LIMS1P48059 325 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 CLCNKAP51800 687 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 BMXP51813 675 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 ARFIP1P53367 373 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 MAPK10P53779 464 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 TAS2R38P59533 333 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 UBE2UQ5VVX9 321 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 EGFLAMQ63HQ2 1017 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 TANGO2Q6ICL3 276 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 CEACAM20Q6UY09 585 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.15□□□□□ -0.14
NUP54-217ENST00000514987 Q6ZNX1 250 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 CCDC71Q8IV32 467 aaPredicted RBP14.15□□□□□ -0.14
NUP54-217ENST00000514987 SFTPA1Q8IWL2 248 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 C2orf73Q8N5S3 287 aaPredicted RBP14.15□□□□□ -0.14
NUP54-217ENST00000514987 ANKRD53Q8N9V6 530 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 OR5AK3PQ8NH89 298 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 RHOXF1Q8NHV9 184 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 PLEKHA8Q96JA3 519 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 FERD3LQ96RJ6 166 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 C1QTNF7Q9BXJ2 289 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 DDX31Q9H8H2 851 aaKnown RBP14.15□□□□□ -0.14
NUP54-217ENST00000514987 PREBQ9HCU5 417 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 RASSF1Q9NS23 344 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 GALNT8Q9NY28 637 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 PSORS1C1Q9UIG5 152 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 RAB23Q9ULC3 237 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 RNF6Q9Y252 685 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.15□□□□□ -0.14
NUP54-217ENST00000514987 PCDHGA2Q9Y5H1 932 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 PCYT1BQ9Y5K3 369 aaPredicted RBP14.15□□□□□ -0.14
NUP54-217ENST00000514987 SNX8Q9Y5X2 465 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 C2orf16Q68DN1 1984 aa14.15□□□□□ -0.14
NUP54-217ENST00000514987 A0A1W2PPV9 198 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 CLDN24A6NM45 220 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 MID1O15344 667 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 CA3P07451 260 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 PSMB9P28065 219 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 EPHA2P29317 976 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 CD6P30203 668 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 PCBP4P57723 403 aaKnown RBP14.14□□□□□ -0.15
NUP54-217ENST00000514987 TMED1Q13445 227 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 ZNF846Q147U1 533 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 SPCS2Q15005 226 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 DGUOKQ16854 277 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 PRSS53Q2L4Q9 553 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 EXOC3L2Q2M3D2 409 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 SPDYE7PQ495Y7 208 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 KIAA1161Q6NSJ0 714 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 GPR153Q6NV75 609 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 C16orf87Q6PH81 154 aa14.14□□□□□ -0.15
NUP54-217ENST00000514987 ZNF605Q86T29 641 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms