RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SERTM1A2A2V5 107 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 CDC14CA4D256 554 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 ANKDD1BA6NHY2 528 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 VSTM2BA6NLU5 285 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 NPIPB8E9PQR5 432 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 H0YIG0 161 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 I3L1I5 382 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 OR7A17O14581 309 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 UBDO15205 165 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 PRAMEF4O60810 478 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 NSA2O95478 260 aaKnown RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 STATHP02808 62 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 SLC35G6P0C7Q6 338 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 PRKAR1AP10644 381 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 EPORP19235 508 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 GPX3P22352 226 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 GSTM2P28161 218 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 CPA2P48052 419 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 PIK3CGP48736 1102 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 MTTPP55157 894 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 FOXA1P55317 472 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 ACTR3P61158 418 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 RPS18P62269 152 aaKnown RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 CDC20Q12834 499 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 TRAF3Q13114 568 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 GTF2H2Q13888 395 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 COL9A2Q14055 689 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 DSG2Q14126 1118 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 E2F2Q14209 437 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 SLBPQ14493 270 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCL28-204ENST00000514421 MAPRE2Q15555 327 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 NKG7Q16617 165 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 DEFB109BQ30KR1 87 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 COQ5Q5HYK3 327 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 PRAMEF9Q5VWM5 478 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 LIPJQ5W064 366 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 CLEC6AQ6EIG7 209 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 TMEM214Q6NUQ4 689 aaKnown RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 NIPAL1Q6NVV3 410 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 GTF2H2CQ6P1K8 395 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 BORAQ6PGQ7 559 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 GPRIN3Q6ZVF9 776 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 SPATA19Q7Z5L4 167 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 PGAM4Q8N0Y7 254 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 METTL27Q8N6F8 245 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 POU5F2Q8N7G0 328 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 ANKRD53Q8N9V6 530 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 KCT2Q8NC54 265 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 OR2Y1Q8NGV0 311 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 NT5CQ8TCD5 201 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 TRPC4APQ8TEL6 797 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 CREB3L4Q8TEY5 395 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 UBE2E3Q969T4 207 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 NACC2Q96BF6 587 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 MIEF2Q96C03 454 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 MMABQ96EY8 250 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 IP6K3Q96PC2 410 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 YIPF2Q9BWQ6 316 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 BRINP2Q9C0B6 783 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 AKTIPQ9H8T0 292 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 WDR54Q9H977 334 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 EFCAB1Q9HAE3 211 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 CLK4Q9HAZ1 481 aaKnown RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 ANKHQ9HCJ1 492 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 SLC52A3Q9NQ40 469 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 SDR39U1Q9NRG7 319 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 ZNF282Q9UDV7 671 aaPredicted RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 BAIAP2L1Q9UHR4 511 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 NXT1Q9UKK6 140 aaKnown RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 POLHQ9Y253 713 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 CCL27Q9Y4X3 112 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 ASB1Q9Y576 335 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.88□□□□□ -1.15
CCL28-204ENST00000514421 CHD6Q8TD26 2715 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 ADAMTS20P59510 1910 aa7.88□□□□□ -1.15
CCL28-204ENST00000514421 IGLV3-12A0A075B6K2 115 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 BBIP1A8MTZ0 92 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 PSMD12O00232 456 aaPredicted RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 PIP5K1BO14986 540 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 NDUFS4O43181 175 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 CNOT3O75175 753 aaKnown RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 SKAP2O75563 359 aaPredicted RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 CLEC3AO75596 197 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 CHEK2O96017 543 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 OTCP00480 354 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 IGHEP01854 428 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 FURINP09958 794 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ALDOCP09972 364 aaKnown RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 ZGLP1P0C6A0 271 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SMIM10L1P0DMW3 83 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 IDO1P14902 403 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 CD1EP15812 388 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 PCSK2P16519 638 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ALOX12P18054 663 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 LBPP18428 481 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 TSPAN8P19075 237 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 FBLP22087 321 aaKnown RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 HNF4AP41235 474 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms