RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PYURFQ96I23 114 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 MRGPRX3Q96LB0 322 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 OPALINQ96PE5 141 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 NEDD4LQ96PU5 975 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 TRNT1Q96Q11 434 aaKnown RBP7.09□□□□□ -1.27
CLIP1-205ENST00000514271 HDAC8Q9BY41 377 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 REG4Q9BYZ8 158 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 CCNB1IP1Q9NPC3 277 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 GPATCH2Q9NW75 528 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 EDARQ9UNE0 448 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 AP3M1Q9Y2T2 418 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 ATP6AP2A0A1C7CYW4 349 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 INPP4BO15327 924 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 ATP6AP2O75787 350 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 KCNK5O95279 499 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 CD160O95971 181 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 LCKP06239 509 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 RRM2P31350 389 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 SLC6A11P48066 632 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 CCR5P51681 352 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 BAK1Q16611 211 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 RFTN2Q52LD8 501 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-205ENST00000514271 SLC35F1Q5T1Q4 408 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 VASNQ6EMK4 673 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 C22orf39Q6P5X5 142 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 IGF2-ASQ6U949 168 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 GPALPP1Q8IXQ4 340 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 PNPLA1Q8N8W4 532 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 OR7A2PQ8NGA2 310 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 FOXJ1Q92949 421 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 ZC3H10Q96K80 434 aaKnown RBP7.09□□□□□ -1.27
CLIP1-205ENST00000514271 EPHX3Q9H6B9 360 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 ERVMER34-1Q9H9K5 563 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 SUSD2Q9UGT4 822 aa7.09□□□□□ -1.27
CLIP1-205ENST00000514271 CREG1O75629 220 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CHEK2O96017 543 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CD70P32970 193 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 RGS6P49758 472 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 NKX2-5P52952 324 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 POLR2LP62875 67 aaKnown RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 METTL11BQ5VVY1 283 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 MICU2Q8IYU8 434 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CYP4Z2PQ8N1L4 340 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ZBTB44Q8NCP5 570 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 RPLP0P6Q8NHW5 317 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 EID2BQ96D98 161 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 SLC47A1Q96FL8 570 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PSKH2Q96QS6 385 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 UBL7Q96S82 380 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 MGME1Q9BQP7 344 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ALG9Q9H6U8 611 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 NIPAL2Q9H841 368 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 USP36Q9P275 1121 aaKnown RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 REV1Q9UBZ9 1251 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 MYO10Q9HD67 2058 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 J3QRE1 110 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 BCKDKO14874 412 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 NADKO95544 446 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 DNTTP04053 509 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 LINC00032P0C843 101 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 GADD45AP24522 165 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 HTR6P50406 440 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CYP4F3Q08477 520 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ELP6Q0PNE2 266 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 MAP4K2Q12851 820 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 BRAT1Q6PJG6 821 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 RGL4Q8IZJ4 473 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ARIH2OSQ8N7S6 290 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM105Q8N8V8 129 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PLA2G15Q8NCC3 412 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CALML6Q8TD86 181 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PPWD1Q96BP3 646 aaKnown RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 UQCC2Q9BRT2 126 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CINPQ9BW66 212 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CIPCQ9C0C6 399 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 RNF167Q9H6Y7 350 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 DYRK4Q9NR20 520 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 THSD1Q9NS62 852 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 NDUFB11Q9NX14 153 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CNOT2Q9NZN8 540 aaKnown RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 TESQ9UGI8 421 aaKnown RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 SLC6A14Q9UN76 642 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 TSC22D4Q9Y3Q8 395 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 EML5Q05BV3 1969 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 BRCA2P51587 3418 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 OTOL1A6NHN0 477 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 B4DXG7 233 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 F5H423 210 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 NOBOXO60393 691 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 SEMA7AO75326 666 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 GPX5O75715 221 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 WDR47O94967 919 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 FTH1P02794 183 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 H2AFB1P0C5Y9 115 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 H2AFB2P0C5Z0 115 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 G6PDP11413 515 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 SRCP12931 536 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ITPKAP23677 461 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms