RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 MMP21Q8N119 569 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 ACOT4Q8N9L9 421 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 CDC26Q8NHZ8 85 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 TSLPQ969D9 159 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 UCN3Q969E3 161 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 RNF166Q96A37 237 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 RGMAQ96B86 450 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 MIEF2Q96C03 454 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 SERINC2Q96SA4 455 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 MAPKAP1Q9BPZ7 522 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 CRB3Q9BUF7 120 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 DPH1Q9BZG8 443 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 MANSC1Q9H8J5 431 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 EML4Q9HC35 981 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 SLCO1B3Q9NPD5 702 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 INTS9Q9NV88 658 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 ZNF282Q9UDV7 671 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 ADGRE2Q9UHX3 823 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 TSC22D4Q9Y3Q8 395 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 TRAF6Q9Y4K3 522 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 MAP4K5Q9Y4K4 846 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 POLR3HQ9Y535 204 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 DNAJC15Q9Y5T4 150 aa9.25□□□□□ -0.93
TOPBP1-209ENST00000513818 SEC16AO15027 2179 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 TPRP12270 2363 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 ITPR1Q14643 2758 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 MGAQ8IWI9 3026 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 URB1O60287 2271 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 IGLV3-12A0A075B6K2 115 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 A0A0A6YYD5 115 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 IGHV3-20A0A0C4DH32 117 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 ATP6AP2A0A1C7CYW4 349 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 VSTM2BA6NLU5 285 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 PSMD12O00232 456 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 SNNO75324 88 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CREG1O75629 220 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 ATP6AP2O75787 350 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 SEMA3DO95025 777 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 BMP10O95393 424 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 ONECUT2O95948 504 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 FHP07954 510 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 PIM1P11309 404 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 GRK2P25098 689 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 TPP2P29144 1249 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 SERPINB5P36952 375 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 LIM2P55344 173 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 RAB38P57729 211 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 RPL38P63173 70 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 RAE1P78406 368 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 ID2Q02363 134 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CHAF1BQ13112 559 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 SLAMF1Q13291 335 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CUL3Q13618 768 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 NR6A1Q15406 480 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 UGT3A2Q3SY77 523 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 SPDYAQ5MJ70 313 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 BROXQ5VW32 411 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 C18orf63Q68DL7 685 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CCDC81Q6ZN84 652 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 FAM47EQ6ZV65 393 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 LANCL3Q6ZV70 420 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 PPP1R32Q7Z5V6 425 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CLNKQ7Z7G1 428 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CLYBLQ8N0X4 340 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 METTL4Q8N3J2 472 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 OR2Y1Q8NGV0 311 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 LRRC8CQ8TDW0 803 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 ZNF75CPQ92670 426 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 TBC1D20Q96BZ9 403 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 C8orf44Q96CB5 159 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 SLC45A3Q96JT2 553 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 C3orf30Q96M34 536 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CENPKQ9BS16 269 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 TBCDQ9BTW9 1192 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 VN1R1Q9GZP7 353 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 SLC26A1Q9H2B4 701 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 BRF2Q9HAW0 419 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 MKKSQ9NPJ1 570 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 MED4Q9NPJ6 270 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 LANCL2Q9NS86 450 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 TEX10Q9NXF1 929 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 VPS29Q9UBQ0 182 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 DCTN4Q9UJW0 460 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 C3orf18Q9UK00 162 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 KCND3Q9UK17 655 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 DAPP1Q9UN19 280 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 PADI2Q9Y2J8 665 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 RAP2CQ9Y3L5 183 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 CCL27Q9Y4X3 112 aa9.24□□□□□ -0.93
TOPBP1-209ENST00000513818 A0A088AWK7 358 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 GLOD5A6NK44 160 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 WASHC1A8K0Z3 465 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ZNF891A8MT65 544 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 IDSB3KWA1 339 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 TGFBR3LH3BV60 316 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ATP8B1O43520 1251 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 PCDH7O60245 1069 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 SCELO95171 688 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 AIFM1O95831 613 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms