RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 BTN3A2P78410 334 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 NAB1Q13506 487 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 E2F2Q14209 437 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 ADPRMQ3LIE5 342 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 MROH9Q5TGP6 573 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 SPINK14Q6IE38 97 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 SLC25A25Q6KCM7 469 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 NIPAL1Q6NVV3 410 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 PAPD4Q6PIY7 484 aaKnown RBP13.59□□□□□ -0.23
LETM1-207ENST00000512669 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 POGLUT1Q8NBL1 392 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 TMEM52Q8NDY8 209 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 KCTD4Q8WVF5 259 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 ZNF592Q92610 1267 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 EXT2Q93063 718 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 MRRFQ96E11 262 aaKnown RBP13.59□□□□□ -0.23
LETM1-207ENST00000512669 GPR78Q96P69 363 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 CD244Q9BZW8 370 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 EHD1Q9H4M9 534 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 RNF112Q9ULX5 631 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 CLDN16Q9Y5I7 305 aa13.59□□□□□ -0.23
LETM1-207ENST00000512669 TGFBR3LH3BV60 316 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 CCNT2O60583 730 aaKnown RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 SLC25A12O75746 678 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 WISP2O76076 250 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 C2P06681 752 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 LTA4HP09960 611 aaKnown RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 MAOAP21397 527 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 CRABP2P29373 138 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 HNRNPFP52597 415 aaKnown RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 OR4D2P58180 307 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 ACTN3Q08043 901 aaPredicted RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 PDK4Q16654 411 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 MEX3BQ6ZN04 569 aaKnown RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 RAPH1Q70E73 1250 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 GALNTL5Q7Z4T8 443 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 UBE3DQ7Z6J8 389 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 KIF2BQ8N4N8 673 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 SNX31Q8N9S9 440 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 NFAM1Q8NET5 270 aaPredicted RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 STAG3L4Q8TBR4 150 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 DMRTA2Q96SC8 542 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 CAPS2Q9BXY5 557 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 FUT8Q9BYC5 575 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 TSPAN10Q9H1Z9 355 aaPredicted RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 RHBGQ9H310 441 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 CLK4Q9HAZ1 481 aaKnown RBP13.58□□□□□ -0.24
LETM1-207ENST00000512669 NMRAL1Q9HBL8 299 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 LRFN1Q9P244 771 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 PPT2Q9UMR5 302 aa13.58□□□□□ -0.24
LETM1-207ENST00000512669 TCRBV16S1A1N1A0A5B0 115 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 URADA6NGE7 173 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 LRRC14BA6NHZ5 514 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 CLGNO14967 610 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 NME2P1O60361 137 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 KERAO60938 352 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 CLEC3AO75596 197 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 NEURL1O76050 574 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 ALDOAP04075 364 aaKnown RBP13.57□□□□□ -0.24
LETM1-207ENST00000512669 NME2P22392 152 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 CASP2P42575 452 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 SLC26A5P58743 744 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 KRTAP10-9P60411 292 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 PCDH1Q08174 1060 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 CHIT1Q13231 466 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 CDSNQ15517 529 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 TBCCQ15814 346 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 XKR6Q5GH73 641 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 TMEM211Q6ICI0 200 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 QSOX2Q6ZRP7 698 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.57□□□□□ -0.24
LETM1-207ENST00000512669 KRT78Q8N1N4 520 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 ELP5Q8TE02 316 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 UBTD2Q8WUN7 234 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 ASB5Q8WWX0 329 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 GAL3ST3Q96A11 431 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 TMEM125Q96AQ2 219 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 SDCCAG3Q96C92 435 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 PTCD3Q96EY7 689 aaKnown RBP13.57□□□□□ -0.24
LETM1-207ENST00000512669 PTCHD1Q96NR3 888 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 F2RL3Q96RI0 385 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 HES7Q9BYE0 225 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 PITHD1Q9GZP4 211 aaPredicted RBP13.57□□□□□ -0.24
LETM1-207ENST00000512669 CDC42EP4Q9H3Q1 356 aaKnown RBP13.57□□□□□ -0.24
LETM1-207ENST00000512669 ACSS3Q9H6R3 686 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 CNOT10Q9H9A5 744 aaKnown RBP13.57□□□□□ -0.24
LETM1-207ENST00000512669 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 PRDM7Q9NQW5 492 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 SNX15Q9NRS6 342 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 ANKRD10Q9NXR5 420 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 NUDT4Q9NZJ9 180 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 ACOT9Q9Y305 439 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 ITPR3Q14573 2671 aa13.57□□□□□ -0.24
LETM1-207ENST00000512669 SPG11Q96JI7 2443 aa13.56□□□□□ -0.24
LETM1-207ENST00000512669 ERI3O43414 337 aaKnown RBP13.56□□□□□ -0.24
LETM1-207ENST00000512669 PRMT3O60678 531 aa13.56□□□□□ -0.24
LETM1-207ENST00000512669 RNH1P13489 461 aaKnown RBP13.56□□□□□ -0.24
LETM1-207ENST00000512669 JAK1P23458 1154 aa13.56□□□□□ -0.24
LETM1-207ENST00000512669 CYB561P49447 251 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms