RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	PIWIL2	Q8TC59	973 aa	Known RBP	13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	FGF11	Q92914	225 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	TM4SF18	Q96CE8	201 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	MVB12A	Q96EY5	273 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	EGLN2	Q96KS0	407 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	KCNC2	Q96PR1	638 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	SERINC2	Q96SA4	455 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	C1orf50	Q9BV19	199 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	CCDC86	Q9H6F5	360 aa	Known RBP	13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	SOX17	Q9H6I2	414 aa	Predicted RBP	13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	LRTM1	Q9HBL6	345 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	PRM3	Q9NNZ6	103 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	IFT80	Q9P2H3	777 aa	Predicted RBP	13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	TRPC4	Q9UBN4	977 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	HEY2	Q9UBP5	337 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	DKK4	Q9UBT3	224 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	DAPP1	Q9UN19	280 aa		13.73	□□□□□ -0.21
MATR3-238	ENST00000512107	MASP2	O00187	686 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	PGRMC2	O15173	223 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	HDAC3	O15379	428 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	CDC123	O75794	336 aa	Predicted RBP	13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	BMP10	O95393	424 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	ALDOC	P09972	364 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	CD82	P27701	267 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	EPHA3	P29320	983 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	TIA1	P31483	386 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	4e-7	■■■□□ 15.2
MATR3-238	ENST00000512107	DLST	P36957	453 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	XCR1	P46094	333 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	AVPR1B	P47901	424 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	IDH3A	P50213	366 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	DNASE1L3	Q13609	305 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	IL10RA	Q13651	578 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	NCF4	Q15080	339 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	AP5B1	Q2VPB7	878 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	SPDYA	Q5MJ70	313 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	C10orf62	Q5T681	223 aa	Predicted RBP	13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	ATP1A1-AS1	Q5TC04	95 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	TMEM198	Q66K66	360 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	EPGN	Q6UW88	154 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	UNQ6494/PRO21346	Q6UXR6	183 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	CRLF3	Q8IUI8	442 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	ESX1	Q8N693	406 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	STT3B	Q8TCJ2	826 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	MAEL	Q96JY0	434 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	YIPF2	Q9BWQ6	316 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	C1orf109	Q9NX04	203 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	SIRT5	Q9NXA8	310 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	BAIAP2L1	Q9UHR4	511 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	SSUH2	Q9Y2M2	353 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	RAX	Q9Y2V3	346 aa		13.72	□□□□□ -0.21
MATR3-238	ENST00000512107	URAD	A6NGE7	173 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	GLOD5	A6NK44	160 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	PROM1	O43490	865 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	RGS14	O43566	566 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	B3GALT2	O43825	422 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	PCDH7	O60245	1069 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	SEC22B	O75396	215 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	KLK3	P07288	261 aa	Predicted RBP	13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	ZGLP1	P0C6A0	271 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	FAM58BP	P0C7Q3	252 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	SDC1	P18827	310 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	EIF2S3	P41091	472 aa	Known RBP	13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	RAB38	P57729	211 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	RPL38	P63173	70 aa	Known RBP	13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	RHAG	Q02094	409 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	ID2	Q02363	134 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	DUSP2	Q05923	314 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	KLC1	Q07866	573 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	IMPG1	Q17R60	797 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	NOXRED1	Q6NXP6	359 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	FAM180B	Q6P0A1	224 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	GALNT18	Q6P9A2	607 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	NUDT13	Q86X67	352 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	CLHC1	Q8NHS4	586 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	C16orf78	Q8WTQ4	265 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	TSLP	Q969D9	159 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	TUBGCP3	Q96CW5	907 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	FAR2	Q96K12	515 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	MARK4	Q96L34	752 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	SLC26A1	Q9H2B4	701 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	RABEP2	Q9H5N1	569 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	NECTIN3	Q9NQS3	549 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	C5AR2	Q9P296	337 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	ADAM29	Q9UKF5	820 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	CDC14A	Q9UNH5	594 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	MAP4K5	Q9Y4K4	846 aa		13.71	□□□□□ -0.21
MATR3-238	ENST00000512107	SETX	Q7Z333	2677 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	B4GALT2	O60909	372 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	SNUPN	O95149	360 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	AIFM1	O95831	613 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	CHEK2	O96017	543 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	VIM	P08670	466 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	RAB40AL	P0C0E4	278 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	CCNYL3	P0C7X3	344 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	BCKDHA	P12694	445 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	AGXT	P21549	392 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	DRD4	P21917	467 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	ITPKB	P27987	946 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms