RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 P4HTMQ9NXG6 502 aa14.68□□□□□ -0.06
SH3TC1-220ENST00000511002 PTGDR2Q9Y5Y4 395 aa14.68□□□□□ -0.06
SH3TC1-220ENST00000511002 HELZ2Q9BYK8 2649 aaKnown RBP14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 H0YIG0 161 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 PLPP1O14494 284 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 ULK1O75385 1050 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 UROSP10746 265 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 PTX3P26022 381 aaPredicted RBP14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 CERS1P27544 350 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 RAP1GDS1P52306 607 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 TLE1Q04724 770 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 CUL3Q13618 768 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 VWA2Q5GFL6 755 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 ZNF793Q6ZN11 406 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 CHSY3Q70JA7 882 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 FAR2Q96K12 515 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 KCNC2Q96PR1 638 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 SERPINI1Q99574 410 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 ACPTQ9BZG2 426 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 SLC26A1Q9H2B4 701 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 PRDM7Q9NQW5 492 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 INTS9Q9NV88 658 aaKnown RBP14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 TRPC4Q9UBN4 977 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 ZDHHC2Q9UIJ5 367 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 PPT2Q9UMR5 302 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 SLC12A4Q9UP95 1085 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 TRAF6Q9Y4K3 522 aa14.67□□□□□ -0.06
SH3TC1-220ENST00000511002 VSTM2BA6NLU5 285 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 SOCS6O14544 535 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 ALBP02768 609 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 FGF4P08620 206 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 SSR2P43308 183 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 EFNA3P52797 238 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 HMGCS1Q01581 520 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 TGM3Q08188 693 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 CSTF3Q12996 717 aaKnown RBP14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 NADK2Q4G0N4 442 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 DCAF10Q5QP82 559 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 MED25Q71SY5 747 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 LAPTM4BQ86VI4 370 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 AMER2Q8N7J2 671 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 ZNF781Q8N8C0 355 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 TMEM102Q8N9M5 508 aaPredicted RBP14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 RAB3IL1Q8TBN0 382 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 STT3BQ8TCJ2 826 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 RGMAQ96B86 450 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 YIPF2Q9BWQ6 316 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 ZNF717Q9BY31 904 aaPredicted RBP14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 MRPL1Q9BYD6 325 aaKnown RBP14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 RBCK1Q9BYM8 510 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 TUBB1Q9H4B7 451 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 MANSC1Q9H8J5 431 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 COPS7BQ9H9Q2 264 aaPredicted RBP14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 BRF2Q9HAW0 419 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 PSD3Q9NYI0 1048 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 PCDHGA9Q9Y5G4 932 aaKnown RBP14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 DNAJC15Q9Y5T4 150 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 HS3ST3B1Q9Y662 390 aa14.66□□□□□ -0.06
SH3TC1-220ENST00000511002 NBASA2RRP1 2371 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 SNNO75324 88 aaPredicted RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 EEDO75530 441 aaKnown RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 SEMA3DO95025 777 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 PIM1P11309 404 aaPredicted RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 HSD3B1P14060 373 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 MMP11P24347 488 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 ATP5A1P25705 553 aaKnown RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 HSD3B2P26439 372 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 BSGP35613 385 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 CASRP41180 1078 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 PGDP52209 483 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 KLC1Q07866 573 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 TBL3Q12788 808 aaKnown RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 KLRB1Q12918 225 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 RUNX2Q13950 521 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 UGT3A2Q3SY77 523 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 KIRREL2Q6UWL6 708 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 ZC3H7AQ8IWR0 971 aaKnown RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 TRIM42Q8IWZ5 723 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 CLYBLQ8N0X4 340 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 CA13Q8N1Q1 262 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 TWIST2Q8WVJ9 160 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 DYDC1Q8WWB3 177 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 ZNF75CPQ92670 426 aaPredicted RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 SERINC2Q96SA4 455 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 CENPKQ9BS16 269 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 TBCDQ9BTW9 1192 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 WDR54Q9H977 334 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 ANAPC2Q9UJX6 822 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 FBXL4Q9UKA2 621 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 RAP2CQ9Y3L5 183 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 MAP4K5Q9Y4K4 846 aa14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 SPENQ96T58 3664 aaKnown RBP14.65□□□□□ -0.06
SH3TC1-220ENST00000511002 GCN1Q92616 2671 aaKnown RBP14.64□□□□□ -0.07
SH3TC1-220ENST00000511002 IGLV3-12A0A075B6K2 115 aa14.64□□□□□ -0.07
SH3TC1-220ENST00000511002 A0A088AWK7 358 aa14.64□□□□□ -0.07
SH3TC1-220ENST00000511002 PIP5K1BO14986 540 aa14.64□□□□□ -0.07
SH3TC1-220ENST00000511002 CHST10O43529 356 aa14.64□□□□□ -0.07
SH3TC1-220ENST00000511002 B3GALT2O43825 422 aa14.64□□□□□ -0.07
SH3TC1-220ENST00000511002 SKAP2O75563 359 aaPredicted RBP14.64□□□□□ -0.07
SH3TC1-220ENST00000511002 JRKO75564 520 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms