RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CAVIN3Q969G5 261 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
SNF8-207ENST00000509995 ALS2CR12Q96Q35 445 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 PANX2Q96RD6 677 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 RHNO1Q9BSD3 238 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 UGT2B28Q9BY64 529 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 PNO1Q9NRX1 252 aaKnown RBP9.84□□□□□ -0.83
SNF8-207ENST00000509995 ABCF3Q9NUQ8 709 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 TMEM184CQ9NVA4 438 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 ARMCX1Q9P291 453 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 TSR3Q9UJK0 312 aaKnown RBP9.84□□□□□ -0.83
SNF8-207ENST00000509995 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 GRID2IPA4D2P6 1211 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 ZNF839A8K0R7 811 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 PSMD12O00232 456 aaPredicted RBP9.83□□□□□ -0.84
SNF8-207ENST00000509995 TNFSF13O75888 250 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 SLC16A8O95907 504 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 B3GALT4O96024 378 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 SOD3P08294 240 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 SKILP12757 684 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 PPP2R1BP30154 601 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 HSD17B2P37059 387 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 TBL3Q12788 808 aaKnown RBP9.83□□□□□ -0.84
SNF8-207ENST00000509995 SPARCL1Q14515 664 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 SLC22A10Q63ZE4 541 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 CAPN13Q6MZZ7 669 aaPredicted RBP9.83□□□□□ -0.84
SNF8-207ENST00000509995 PLD6Q8N2A8 252 aaKnown RBP9.83□□□□□ -0.84
SNF8-207ENST00000509995 PAQR8Q8TEZ7 354 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 ZNF480Q8WV37 535 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 UCN3Q969E3 161 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 JSRP1Q96MG2 331 aaPredicted RBP9.83□□□□□ -0.84
SNF8-207ENST00000509995 PANX3Q96QZ0 392 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 FAM129AQ9BZQ8 928 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 CHODLQ9H9P2 273 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 PROK2Q9HC23 129 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 SLC6A5Q9Y345 797 aa9.83□□□□□ -0.84
SNF8-207ENST00000509995 FAM234BA2RU67 622 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 MROH6A6NGR9 719 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 OR10H2O60403 315 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 CST8O60676 142 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 NDUFS7O75251 213 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 AVILO75366 819 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNF8-207ENST00000509995 IGHV4-31P0DP07 118 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 RNH1P13489 461 aaKnown RBP9.82□□□□□ -0.84
SNF8-207ENST00000509995 CYP4B1P13584 511 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 POU2F1P14859 743 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 CREB1P16220 341 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 ALOX12P18054 663 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 HRH2P25021 359 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 EEF1A1P68104 462 aaKnown RBP9.82□□□□□ -0.84
SNF8-207ENST00000509995 GAB1Q13480 694 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 PRPSAP1Q14558 356 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 THEMIS2Q5TEJ8 643 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 EEF1A1P5Q5VTE0 462 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 NIPAL1Q6NVV3 410 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 AKAP1Q92667 903 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNF8-207ENST00000509995 P3H4Q92791 437 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 MRFAP1L1Q96HT8 127 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 HS6ST2Q96MM7 605 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 PKP4Q99569 1192 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 FERMT1Q9BQL6 677 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 TMEM204Q9BSN7 226 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 BARX1Q9HBU1 254 aaPredicted RBP9.82□□□□□ -0.84
SNF8-207ENST00000509995 ADAP2Q9NPF8 381 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 KCNS2Q9ULS6 477 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 LIPT1Q9Y234 373 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 MMACHCQ9Y4U1 282 aa9.82□□□□□ -0.84
SNF8-207ENST00000509995 A0A1W2PNV4 684 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 SLC35F4A4IF30 521 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 HACD1B0YJ81 288 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 C16orf97H3BN30 126 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 TGFBR3LH3BV60 316 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 PRMT5O14744 637 aaPredicted RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 NDUFS4O43181 175 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 KLF4O43474 513 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 LCMT2O60294 686 aaKnown RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 TRAPPC6AO75865 159 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 GOT2P00505 430 aaKnown RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 C1QAP02745 245 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 HPNP05981 417 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 DANCRP0C864 163 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 CHRM3P20309 590 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 TFDP2Q14188 446 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 SEMA3AQ14563 771 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 PHKG1Q16816 387 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 ZNF791Q3KP31 576 aaPredicted RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 PTRHD1Q6GMV3 140 aaKnown RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 FAM166AQ6J272 317 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 ZNF474Q6S9Z5 364 aaPredicted RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 AFTPHQ6ULP2 937 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 MFSD7Q6UXD7 560 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 ADGRE4PQ86SQ3 457 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 SCUBE1Q8IWY4 988 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 LRRC56Q8IYG6 542 aaPredicted RBP9.81□□□□□ -0.84
SNF8-207ENST00000509995 OR10H5Q8NGA6 315 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 OR13J1Q8NGT2 312 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 HAUS1Q96CS2 278 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 ZNF597Q96LX8 424 aa9.81□□□□□ -0.84
SNF8-207ENST00000509995 TUBA1CQ9BQE3 449 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms