RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 DLSTP36957 453 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 PPARGP37231 505 aaPredicted RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 SLC6A9P48067 706 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 FNTAP49354 379 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 UCNP55089 124 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 MPP1Q00013 466 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 DR1Q01658 176 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 PRKAA1Q13131 559 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 RPA4Q13156 261 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 TUBB3Q13509 450 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 ERV3-1Q14264 604 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 IL11RAQ14626 422 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 HLXQ14774 488 aaPredicted RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 MLC1Q15049 377 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 ZIC1Q15915 447 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 DEFB109BQ30KR1 87 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 LINC00303Q3SY05 128 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 TAF1BQ53T94 588 aaPredicted RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 HSP90AA5PQ58FG0 334 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 ACSBG2Q5FVE4 666 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 PLAC9Q5JTB6 97 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 AARS2Q5JTZ9 985 aaKnown RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 CTSL3PQ5NE16 218 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 RNASEH2BQ5TBB1 312 aaKnown RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 IZUMO3Q5VZ72 239 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 ZNF470Q6ECI4 717 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 MRNIPQ6NTE8 343 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 ZNF549Q6P9A3 640 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 KLHL35Q6PF15 583 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 CNSTQ6PJW8 725 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 SYT10Q6XYQ8 523 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 OTOAQ7RTW8 1153 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 PRSS42Q7Z5A4 293 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 TMEM135Q86UB9 458 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 HOOK3Q86VS8 718 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 OOSP2Q86WS3 158 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 SLC22A15Q8IZD6 547 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 SLC38A9Q8NBW4 561 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 GSDMBQ8TAX9 411 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 GRK7Q8WTQ7 553 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 ASZ1Q8WWH4 475 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 LPGAT1Q92604 370 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 STAMBPL1Q96FJ0 436 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 CFAP36Q96G28 342 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 SLC41A2Q96JW4 573 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 TRAPPC9Q96Q05 1148 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 OR2A14Q96R47 310 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 NAPGQ99747 312 aaPredicted RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 RAB33BQ9H082 229 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 C11orf54Q9H0W9 315 aaPredicted RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 TFB2MQ9H5Q4 396 aaKnown RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 GPN2Q9H9Y4 310 aaPredicted RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 PLAC1Q9HBJ0 212 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 XAB2Q9HCS7 855 aaKnown RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 FAM60AQ9NP50 221 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 FGF21Q9NSA1 209 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 IARS2Q9NSE4 1012 aaKnown RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 STARD5Q9NSY2 213 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 ABCF3Q9NUQ8 709 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 SEMA5BQ9P283 1151 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 STOX2Q9P2F5 926 aaPredicted RBP4.35□□□□□ -1.71
NUP54-206ENST00000508465 PCYOX1Q9UHG3 505 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 POMT2Q9UKY4 750 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 PADI1Q9ULC6 663 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 SNX24Q9Y343 169 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 RPS6KL1Q9Y6S9 549 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 PTPRQQ9UMZ3 2332 aa4.35□□□□□ -1.71
NUP54-206ENST00000508465 SDK2Q58EX2 2172 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 AHCTF1Q8WYP5 2266 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CACNA1GO43497 2377 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CFAP46Q8IYW2 2715 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PRRC2CQ9Y520 2896 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 FAM237BA0A1B0GVD1 139 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TLCD2A6NGC4 264 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 C2orf74A8MZ97 194 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TMEM150CB9EJG8 249 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PYCARD-AS1I3L0S3 204 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PPP6CO00743 305 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 DNALI1O14645 258 aaPredicted RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 TOX3O15405 576 aaPredicted RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 SCRG1O75711 98 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 AGFG2O95081 481 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ZBTB11O95625 1053 aaPredicted RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 AHSGP02765 367 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ANKRD34CP0C6C1 535 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 FGF5P12034 268 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 MLNP12872 115 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PKMP14618 531 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 PPP3CBP16298 524 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TCN2P20062 427 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 MCM3P25205 808 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CD82P27701 267 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PSMB5P28074 263 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 GABRB3P28472 473 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 MPGP29372 298 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PEBP1P30086 187 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 SHMT2P34897 504 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ELK3P41970 407 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 SLC1A2P43004 574 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms