RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 ZNF888P0CJ79 500 aaPredicted RBP12.84□□□□□ -0.35
DDR1-260ENST00000507533 CDH1P12830 882 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 RNH1P13489 461 aaKnown RBP12.84□□□□□ -0.35
DDR1-260ENST00000507533 NMBRP28336 390 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 CEACAM8P31997 349 aaPredicted RBP12.84□□□□□ -0.35
DDR1-260ENST00000507533 RPL22P35268 128 aaKnown RBP12.84□□□□□ -0.35
DDR1-260ENST00000507533 DNASE1L1P49184 302 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 CRADDP78560 199 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 FOXO1Q12778 655 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 CBLBQ13191 982 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 PWP1Q13610 501 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 TERF2Q15554 542 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 RNF187Q5TA31 235 aaPredicted RBP12.84□□□□□ -0.35
DDR1-260ENST00000507533 MRNIPQ6NTE8 343 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 TTC27Q6P3X3 843 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 PRSS57Q6UWY2 283 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 RTL4Q6ZR62 310 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 SPNS2Q8IVW8 549 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 RASL10BQ96S79 203 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 SLC30A3Q99726 388 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 AARSD1Q9BTE6 412 aaKnown RBP12.84□□□□□ -0.35
DDR1-260ENST00000507533 TUBA8Q9NY65 449 aaPredicted RBP12.84□□□□□ -0.35
DDR1-260ENST00000507533 MYOTQ9UBF9 498 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 PCDHGB3Q9Y5G1 929 aa12.84□□□□□ -0.35
DDR1-260ENST00000507533 GOLGA8KD6RF30 607 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 GOLGA8TH3BQL2 631 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 OR1F1O43749 312 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 MPC1LP0DKB6 136 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 BMP7P18075 431 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 PAFAH1B1P43034 410 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 FNTAP49354 379 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 CLCN7P51798 805 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 GPR143P51810 404 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 ADARP55265 1226 aaKnown RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 WNT3P56703 355 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 SESN2P58004 480 aaPredicted RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 SORDQ00796 357 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 CUL1Q13616 776 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 TTLL9Q3SXZ7 439 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 UBE2R2Q712K3 238 aaPredicted RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 ABHD13Q7L211 337 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 SREK1Q8WXA9 508 aaKnown RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 PIGTQ969N2 578 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 ALKBH8Q96BT7 664 aaKnown RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 SCYL1Q96KG9 808 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 TCF12Q99081 682 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 EPB41L4BQ9H329 900 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 CLK4Q9HAZ1 481 aaKnown RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 SEMA4BQ9NPR2 832 aaPredicted RBP12.83□□□□□ -0.36
DDR1-260ENST00000507533 RAB6BQ9NRW1 208 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 SACM1LQ9NTJ5 587 aa12.83□□□□□ -0.36
DDR1-260ENST00000507533 KDM4EB2RXH2 506 aaPredicted RBP12.82□□□□□ -0.36
DDR1-260ENST00000507533 AVILO75366 819 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 VAPBO95292 243 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 EPPINO95925 133 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 IL2RAP01589 272 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 KRT14P02533 472 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 P04436 131 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 APRTP07741 180 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 ARNTP27540 789 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 PPP2R1BP30154 601 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 RAB8AP61006 207 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 RGS1Q08116 209 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 CYHR1Q6ZMK1 362 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 GOLM1Q8NBJ4 401 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 UTP15Q8TED0 518 aaKnown RBP12.82□□□□□ -0.36
DDR1-260ENST00000507533 GRK7Q8WTQ7 553 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 SGCZQ96LD1 299 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 C16orf45Q96MC5 204 aaPredicted RBP12.82□□□□□ -0.36
DDR1-260ENST00000507533 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 MMACHCQ9Y4U1 282 aa12.82□□□□□ -0.36
DDR1-260ENST00000507533 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.82□□□□□ -0.36
DDR1-260ENST00000507533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.81□□□□□ -0.36
DDR1-260ENST00000507533 AHRRA9YTQ3 701 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
DDR1-260ENST00000507533 CCL3P10147 92 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 TIMP3P35625 211 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 HNF4AP41235 474 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 CCR8P51685 355 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 AGFG1P52594 562 aaKnown RBP12.81□□□□□ -0.36
DDR1-260ENST00000507533 ZNF136P52737 540 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 BMPR2Q13873 1038 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 TRIP13Q15645 432 aaPredicted RBP12.81□□□□□ -0.36
DDR1-260ENST00000507533 ACSF3Q4G176 576 aaPredicted RBP12.81□□□□□ -0.36
DDR1-260ENST00000507533 HMBOX1Q6NT76 420 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 CES3Q6UWW8 571 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 LACC1Q8IV20 430 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 CA13Q8N1Q1 262 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 GIMAP7Q8NHV1 300 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 NT5CQ8TCD5 201 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 SMPDL3BQ92485 455 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 DACH2Q96NX9 599 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
DDR1-260ENST00000507533 ATG4BQ9Y4P1 393 aa12.81□□□□□ -0.36
DDR1-260ENST00000507533 CCDC188H7C350 402 aa12.8□□□□□ -0.36
DDR1-260ENST00000507533 RFPL3SP0C7P2 107 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms