RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 POU2F1P14859 743 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 PPP2R1BP30154 601 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ADRA1AP35348 466 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 UGT2B10P36537 528 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 GPR143P51810 404 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 HK2P52789 917 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 RPS15AP62244 130 aaKnown RBP6.58□□□□□ -1.36
VCAN-207ENST00000507162 ABATP80404 500 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 KLHL30Q0D2K2 578 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 PRPSAP1Q14558 356 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 HERC3Q15034 1050 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 PHKG1Q16816 387 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 DEFB134Q4QY38 66 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ANKRD20A4Q4UJ75 823 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ODF2Q5BJF6 829 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 BEX5Q5H9J7 111 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ANKRD20A2Q5SQ80 823 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ANKRD20A1Q5TYW2 823 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ANKRD20A3Q5VUR7 823 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 FAM166AQ6J272 317 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 OPN5Q6U736 354 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 HSDL2Q6YN16 418 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ASPGQ86U10 573 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 LRRC25Q8N386 305 aaPredicted RBP6.58□□□□□ -1.36
VCAN-207ENST00000507162 CNEP1R1Q8N9A8 125 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 STYXQ8WUJ0 223 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 NTNG2Q96CW9 530 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 PGM2Q96G03 612 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 PLPPR2Q96GM1 343 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 PDLIM2Q96JY6 352 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 VAT1Q99536 393 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 TM9SF2Q99805 663 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 TBL1YQ9BQ87 522 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 SLC39A3Q9BRY0 314 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 UGT2B28Q9BY64 529 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 KLHL4Q9C0H6 718 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 PRDM14Q9GZV8 571 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 OPN3Q9H1Y3 402 aaPredicted RBP6.58□□□□□ -1.36
VCAN-207ENST00000507162 C10orf88Q9H8K7 445 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 QPCTLQ9NXS2 382 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ARMCX1Q9P291 453 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 ZNF148Q9UQR1 794 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 RYR3Q15413 4870 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 RAI1Q7Z5J4 1906 aaPredicted RBP6.58□□□□□ -1.36
VCAN-207ENST00000507162 YLPM1P49750 1951 aaKnown RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 KCNE1BA0A087WTH5 132 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 IGKV3D-11A0A0A0MRZ8 115 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 CCDC162PA2VCL2 907 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 LRRC3CA6NJW4 275 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 GFYI3L273 518 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 LCMT2O60294 686 aaKnown RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 GALR3O60755 368 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 ZNF354AO60765 605 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 SYF2O95926 243 aaKnown RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 IFNA16P05015 189 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 TNNT1P13805 278 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 SRP14P37108 136 aaKnown RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 COILP38432 576 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 PNLIPRP1P54315 467 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 LOXL1Q08397 574 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 GAB1Q13480 694 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 POU6F1Q14863 301 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 DCST1Q5T197 706 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 ERICH6BQ5W0A0 696 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 PTRHD1Q6GMV3 140 aaKnown RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 DENND5AQ6IQ26 1287 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 CAPN13Q6MZZ7 669 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 ZNF474Q6S9Z5 364 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 LYPD8Q6UX82 237 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 TREML4Q6UXN2 200 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 DNM1P46Q6ZS02 220 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 KIAA1328Q86T90 577 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 BANPQ8N9N5 519 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 MCUQ8NE86 351 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 GABPB2Q8TAK5 448 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 ZPLD1Q8TCW7 415 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 SMAP2Q8WU79 429 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 UCN3Q969E3 161 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 HAUS1Q96CS2 278 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 TM4SF19Q96DZ7 209 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 ZFP3Q96NJ6 502 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 PKP4Q99569 1192 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 C19orf43Q9BQ61 176 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 TUBA1CQ9BQE3 449 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 FERMT1Q9BQL6 677 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 NTMT1Q9BV86 223 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 ACBD3Q9H3P7 528 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 ZNF696Q9H7X3 374 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 BARX1Q9HBU1 254 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 EML4Q9HC35 981 aaKnown RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 TMEM184CQ9NVA4 438 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 TRHDEQ9UKU6 1024 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 MAPRE3Q9UPY8 281 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 AAR2Q9Y312 384 aaKnown RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 MAGED1Q9Y5V3 778 aaPredicted RBP6.57□□□□□ -1.36
VCAN-207ENST00000507162 SLC22A7Q9Y694 548 aa6.57□□□□□ -1.36
VCAN-207ENST00000507162 MED12LQ86YW9 2145 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 NCKAP5O14513 1909 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 A0A096LNT2 108 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms