RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 M1APQ8TC57 530 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 PPP4R1Q8TF05 950 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 TSLPQ969D9 159 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 L3HYPDHQ96EM0 354 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 CDK15Q96Q40 435 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 LPAR4Q99677 370 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 PRM3Q9NNZ6 103 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 KCMF1Q9P0J7 381 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 EMCNQ9ULC0 261 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
PDCD6-204ENST00000506909 SHANK1Q9Y566 2161 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 MYO18BQ8IUG5 2567 aa12.74□□□□□ -0.37
PDCD6-204ENST00000506909 TLDC2A0PJX2 215 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 BLACEA4D250 179 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 SYNDIG1LA6NDD5 238 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 J3QKU1 62 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 RTCAO00442 366 aaKnown RBP12.73□□□□□ -0.37
PDCD6-204ENST00000506909 PPP6CO00743 305 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 PROCP04070 461 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 ITGAMP11215 1152 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 KRT4P19013 534 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 SSR2P43308 183 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 NEK2P51955 445 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 OR4D2P58180 307 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 NAA20P61599 178 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 MFAP5Q13361 173 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 EXT1Q16394 746 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 BTBD16Q32M84 506 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 FRG2Q64ET8 278 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 PAPD4Q6PIY7 484 aaKnown RBP12.73□□□□□ -0.37
PDCD6-204ENST00000506909 RPS27LQ71UM5 84 aaKnown RBP12.73□□□□□ -0.37
PDCD6-204ENST00000506909 ARMC2Q8NEN0 867 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 PNPLA2Q96AD5 504 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 TMEM237Q96Q45 408 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 FRG2BQ96QU4 278 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 SERPINI1Q99574 410 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 MAPKAP1Q9BPZ7 522 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 TMEM109Q9BVC6 243 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 EPN3Q9H201 632 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 EPS8L2Q9H6S3 715 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 ZBTB20Q9HC78 741 aaPredicted RBP12.73□□□□□ -0.37
PDCD6-204ENST00000506909 NECTIN3Q9NQS3 549 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 PRTFDC1Q9NRG1 225 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 LGALS13Q9UHV8 139 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 ZNF225Q9UK10 706 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
PDCD6-204ENST00000506909 A0A1B0GTL3 188 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 G3V2L1 256 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SAP18O00422 153 aaKnown RBP12.72□□□□□ -0.37
PDCD6-204ENST00000506909 PLPP1O14494 284 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 COPEO14579 308 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 PLIN3O60664 434 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SH3BGRLO75368 114 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SORBS2O94875 1100 aaKnown RBP12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SEMA3DO95025 777 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 CELA2AP08217 269 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 MYL2P10916 166 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 MAOAP21397 527 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SOX11P35716 441 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 CD97P48960 835 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 RAP1GDS1P52306 607 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SLC26A5P58743 744 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 TLE1Q04724 770 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 IFFO1Q0D2I5 559 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 IFT88Q13099 833 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SLC6A19Q695T7 634 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 TTC19Q6DKK2 380 aaPredicted RBP12.72□□□□□ -0.37
PDCD6-204ENST00000506909 H3F3CQ6NXT2 135 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 LETMD1Q6P1Q0 360 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 ZYG11AQ6WRX3 759 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 Q6ZS92 163 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 ZCCHC7Q8N3Z6 543 aaKnown RBP12.72□□□□□ -0.37
PDCD6-204ENST00000506909 C7orf57Q8NEG2 295 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 RDH11Q8TC12 318 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 BRIX1Q8TDN6 353 aaKnown RBP12.72□□□□□ -0.37
PDCD6-204ENST00000506909 TRPC4APQ8TEL6 797 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 ZNF382Q96SR6 550 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 ZNF717Q9BY31 904 aaPredicted RBP12.72□□□□□ -0.37
PDCD6-204ENST00000506909 DDX31Q9H8H2 851 aaKnown RBP12.72□□□□□ -0.37
PDCD6-204ENST00000506909 MMP25Q9NPA2 562 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 PTGFRNQ9P2B2 879 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 TRPS1Q9UHF7 1281 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 B3GNT3Q9Y2A9 372 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 STK38LQ9Y2H1 464 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 SPACA6W5XKT8 324 aa12.72□□□□□ -0.37
PDCD6-204ENST00000506909 NBASA2RRP1 2371 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 CTNSO60931 367 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 OR4F21O95013 312 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 ETHE1O95571 254 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 MLYCDO95822 493 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 TSPAN8P19075 237 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 BSGP35613 385 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 HNRNPFP52597 415 aaKnown RBP12.71□□□□□ -0.37
PDCD6-204ENST00000506909 SLC13A2Q13183 592 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 TERF2Q15554 542 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 PLEKHN1Q494U1 663 aaPredicted RBP12.71□□□□□ -0.37
PDCD6-204ENST00000506909 COLEC12Q5KU26 742 aa12.71□□□□□ -0.37
PDCD6-204ENST00000506909 TRABD2AQ86V40 505 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms