RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 FAM47BQ8NA70 645 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 PDPRQ8NCN5 879 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 SRFBP1Q8NEF9 429 aaKnown RBP11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 C7orf57Q8NEG2 295 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 C16orf52Q8NHV5 167 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 STAG3L4Q8TBR4 150 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 AGAP11Q8TF27 550 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 PHF10Q8WUB8 498 aaKnown RBP11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 DAZLQ92904 295 aaKnown RBP11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 NCLNQ969V3 563 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 KIAA1191Q96A73 305 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 MTFMTQ96DP5 389 aaKnown RBP11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 UBXN10Q96LJ8 280 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 KCNC2Q96PR1 638 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 VKORC1Q9BQB6 163 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 DPH5Q9H2P9 285 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 PRM3Q9NNZ6 103 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 PTBP2Q9UKA9 531 aaKnown RBP11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 ZNF490Q9ULM2 529 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 RNF112Q9ULX5 631 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 DAPP1Q9UN19 280 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 ERVK-11Q9UQG0 969 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 ASB1Q9Y576 335 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 CLCA3PQ9Y6N3 262 aa11.24□□□□□ -0.61
PDLIM7-214ENST00000505746 FAM159BA6NKW6 160 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 A8MVJ9 347 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CYR61O00622 381 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CCNT2O60583 730 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 TBX6O95947 436 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 TUBB4AP04350 444 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CERS1P27544 350 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 PTGS2P35354 604 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CASP2P42575 452 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 HNRNPFP52597 415 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 MRPS25P82663 173 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 IRF8Q02556 426 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CAV1Q03135 178 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 STX4Q12846 297 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CHIT1Q13231 466 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 SERTAD2Q14140 314 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 ZKSCAN8Q15776 578 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 FBXO48Q5FWF7 155 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 SYT10Q6XYQ8 523 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 RAPH1Q70E73 1250 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 LRRC70Q7Z2Q7 622 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CTAGE3PQ8IX95 158 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 MORN4Q8NDC4 146 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 TMEM52Q8NDY8 209 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 SPATA4Q8NEY3 305 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 ESAMQ96AP7 390 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 F2RL3Q96RI0 385 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 TBCDQ9BTW9 1192 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 ALOXE3Q9BYJ1 711 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CD244Q9BZW8 370 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 LYRM4Q9HD34 91 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 PRDM7Q9NQW5 492 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 HPF1Q9NWY4 346 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 COQ3Q9NZJ6 369 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 VTI1BQ9UEU0 232 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 ZNF223Q9UK11 482 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 UTP11Q9Y3A2 253 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 CLDN16Q9Y5I7 305 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 SPACA6W5XKT8 324 aa11.23□□□□□ -0.61
PDLIM7-214ENST00000505746 A0A1B0GTH9 108 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 RAD51CO43502 376 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 HS6ST1O60243 411 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 PRAMEF4O60810 478 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 OR2J2O76002 312 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 SNRPB2P08579 225 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 TNNI3P19429 210 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 PPP2R1BP30154 601 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 SERPINB1P30740 379 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 PTGER1P34995 402 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 MSH2P43246 934 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 TMEM35AQ53FP2 167 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 PRAMEF9Q5VWM5 478 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 PAOXQ6QHF9 649 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 HSDL2Q6YN16 418 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 CHSY3Q70JA7 882 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 MDGA2Q7Z553 956 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 FGD2Q7Z6J4 655 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 CLNKQ7Z7G1 428 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 TBC1D1Q86TI0 1168 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 CHERPQ8IWX8 916 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 ZFP62Q8NB50 900 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 OR14A16Q8NHC5 309 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 FAM57AQ8TBR7 257 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 CA5BP1Q8WTZ4 195 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 ASB15Q8WXK1 588 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 DMRTA2Q96SC8 542 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 CSF3RQ99062 836 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 PHACTR1Q9C0D0 580 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 NMRAL1Q9HBL8 299 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 KCMF1Q9P0J7 381 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 MYOTQ9UBF9 498 aa11.22□□□□□ -0.61
PDLIM7-214ENST00000505746 PPT2Q9UMR5 302 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms