RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
PDLIM5-208ENST00000504489 ADAM29Q9UKF5 820 aa11.24□□□□□ -0.61
PDLIM5-208ENST00000504489 LOC400499M0QZD8 3231 aa11.24□□□□□ -0.61
PDLIM5-208ENST00000504489 DSPP15924 2871 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-208ENST00000504489 ZZEF1O43149 2961 aa11.24□□□□□ -0.61
PDLIM5-208ENST00000504489 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 MGAQ8IWI9 3026 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 CACNA1GO43497 2377 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 NPIPB8E9PQR5 432 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 KLF11O14901 512 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 LYPLA1O75608 230 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 CHEK2O96017 543 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 IGHEP01854 428 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 UMODP07911 640 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 FHP07954 510 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 CHN1P15882 459 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 NR1D1P20393 614 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 CERS1P27544 350 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 RAB38P57729 211 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 OLR1P78380 273 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 KLC1Q07866 573 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 TBL3Q12788 808 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 UGT8Q16880 541 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 TUBB8Q3ZCM7 444 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 HSP90B2PQ58FF3 399 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 SH2D4BQ5SQS7 431 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 FAM69BQ5VUD6 431 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 ATG16L1Q676U5 607 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 MRM1Q6IN84 353 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 SCIMPQ6UWF3 145 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 PAGE2Q7Z2X7 111 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 TMEM151BQ8IW70 566 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 SHISA5Q8N114 240 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 ADAMTS17Q8TE56 1095 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 ADAMTS18Q8TE60 1221 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 CHTF18Q8WVB6 975 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 SORT1Q99523 831 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 SORBS1Q9BX66 1292 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 MRPL1Q9BYD6 325 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 ACPTQ9BZG2 426 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 C20orf27Q9GZN8 174 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 SOX17Q9H6I2 414 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 MANSC1Q9H8J5 431 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 ZNF395Q9H8N7 513 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 CPNE5Q9HCH3 593 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 LANCL2Q9NS86 450 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 SEMA3GQ9NS98 782 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 KCMF1Q9P0J7 381 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 DAPP1Q9UN19 280 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 RAP2CQ9Y3L5 183 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 DNAJC15Q9Y5T4 150 aa11.23□□□□□ -0.61
PDLIM5-208ENST00000504489 A0A0A6YYD5 115 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 IDSB3KWA1 339 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 TMEM233B4DJY2 109 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 PSMD12O00232 456 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 SLC28A1O00337 649 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 PCDH17O14917 1159 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 NKX2-8O15522 239 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 SNNO75324 88 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 EEDO75530 441 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 JRKO75564 520 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 JAK1P23458 1154 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 PRPH2P23942 346 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 MMP11P24347 488 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 EMP2P54851 167 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 LIM2P55344 173 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 FOXL2P58012 376 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 CDC20Q12834 499 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 SLAMF1Q13291 335 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 IL10RAQ13651 578 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 ERV3-1Q14264 604 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 CYP20A1Q6UW02 462 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 SHISA6Q6ZSJ9 500 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 COMMD6Q7Z4G1 85 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 CNTRLQ7Z7A1 2325 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 NUDT13Q86X67 352 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 RAB43Q86YS6 212 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 PRSS58Q8IYP2 241 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 TNRC6AQ8NDV7 1962 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 PLPP5Q8NEB5 264 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 ZNF75CPQ92670 426 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 METTL2AQ96IZ6 378 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 IP6K3Q96PC2 410 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 CCT7Q99832 543 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 MAPKAP1Q9BPZ7 522 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 CRB3Q9BUF7 120 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 TUBB1Q9H4B7 451 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 INTS9Q9NV88 658 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 THAP1Q9NVV9 213 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 LYARQ9NX58 379 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 SIRT5Q9NXA8 310 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 MS4A12Q9NXJ0 267 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 PHF11Q9UIL8 331 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 C3orf18Q9UK00 162 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 FIS1Q9Y3D6 152 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 CCL27Q9Y4X3 112 aa11.22□□□□□ -0.61
PDLIM5-208ENST00000504489 EPG5Q9HCE0 2579 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 BLACEA4D250 179 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 FAM227AF5H4B4 570 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 CYR61O00622 381 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms