RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 SF3A3Q12874 501 aaKnown RBP eCLIP12.52□□□□□ -0.414e-6■■■■□ 22.2
PDLIM7-212ENST00000504380 XKR7Q5GH72 579 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 CCNYL2Q5T2Q4 361 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 MFSD4BQ5TF39 518 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 C18orf63Q68DL7 685 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 FAAH2Q6GMR7 532 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 CYP20A1Q6UW02 462 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 MAVSQ7Z434 540 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 NUDT13Q86X67 352 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 CRLF3Q8IUI8 442 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 SPACA3Q8IXA5 215 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 MMP21Q8N119 569 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 TMEM52Q8NDY8 209 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 MIEF2Q96C03 454 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 C19orf60Q96EN9 201 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 C7orf26Q96N11 449 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 ROGDIQ9GZN7 287 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 ACTL8Q9H568 366 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 DDX31Q9H8H2 851 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 LRTM1Q9HBL6 345 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 NMRK1Q9NWW6 199 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 AHSPQ9NZD4 102 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 KCMF1Q9P0J7 381 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 ATG4BQ9Y4P1 393 aa12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 POLR3HQ9Y535 204 aaPredicted RBP12.52□□□□□ -0.41
PDLIM7-212ENST00000504380 A0A088AWK7 358 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 GOLGA8QA0A0J9YX86 632 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 GOLGA8OA6NCC3 632 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 VSTM2BA6NLU5 285 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 GOLGA8NF8WBI6 632 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 LSM1O15116 133 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 PCDH7O60245 1069 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 KLF7O75840 302 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 RSL1D1O76021 490 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 SNUPNO95149 360 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 SCELO95171 688 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 BMP10O95393 424 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 FAM58BPP0C7Q3 252 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 RNH1P13489 461 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 ZNF10P21506 573 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 PTPN4P29074 926 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 RAB38P57729 211 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 BTG2P78543 158 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 KLC1Q07866 573 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 ACSM2AQ08AH3 577 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 RFTN2Q52LD8 501 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 SOWAHCQ53LP3 525 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 ATP1A1-AS1Q5TC04 95 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 ACSM2BQ68CK6 577 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 MRM1Q6IN84 353 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 RGS9BPQ6ZS82 235 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 AMER2Q8N7J2 671 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 FKBP10Q96AY3 582 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 TUBGCP3Q96CW5 907 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 SPSB2Q99619 263 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 NPLQ9BXD5 320 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 WDR55Q9H6Y2 383 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 MKKSQ9NPJ1 570 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 LANCL2Q9NS86 450 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 C1orf109Q9NX04 203 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 TEX10Q9NXF1 929 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 FAM53CQ9NYF3 392 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 TCFL5Q9UL49 500 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 DAPP1Q9UN19 280 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 ASB4Q9Y574 426 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 APC2O95996 2303 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 LAMA5O15230 3695 aa12.51□□□□□ -0.41
PDLIM7-212ENST00000504380 IGLV3-12A0A075B6K2 115 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 A0A1W2PR48 441 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 GLOD5A6NK44 160 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 C21orf140B9A014 251 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 CYR61O00622 381 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 SDHDO14521 159 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 ZNF195O14628 629 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 HDAC3O15379 428 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 NKX2-8O15522 239 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 EDF1O60869 148 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 ALBP02768 609 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 UMODP07911 640 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 FHP07954 510 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 CPN2P22792 545 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 HK2P52789 917 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 MAPK12P53778 367 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 RPL38P63173 70 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 SKP1P63208 163 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 ID2Q02363 134 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 IL10RAQ13651 578 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 KIAA0040Q15053 153 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 MINDY4Q4G0A6 757 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 SLC9B1Q4ZJI4 515 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 NIPAL1Q6NVV3 410 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 RNF165Q6ZSG1 346 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 PAGE2Q7Z2X7 111 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 CLNKQ7Z7G1 428 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 GPR180Q86V85 440 aa12.5□□□□□ -0.41
PDLIM7-212ENST00000504380 PROSER1Q86XN7 944 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms