RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 G3BP2Q9UN86 482 aaKnown RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 MAP4K5Q9Y4K4 846 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 AKAP13Q12802 2813 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 CACNA1AO00555 2505 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 CHST10O43529 356 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 DNAJB6O75190 326 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 PRKRAO75569 313 aaKnown RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 CDC123O75794 336 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 AIFM1O95831 613 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 IL3P08700 152 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 FAM58BPP0C7Q3 252 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 LIPCP11150 499 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 PIM1P11309 404 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 RNH1P13489 461 aaKnown RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 CPN2P22792 545 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 BUD31P41223 144 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ALDH9A1P49189 494 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ARFIP2P53365 341 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 LIM2P55344 173 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 RUNX2Q13950 521 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 LSM12Q3MHD2 195 aaKnown RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 TBC1D25Q3MII6 688 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 IL23RQ5VWK5 629 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 MLIPQ5VWP3 458 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 TMEM198Q66K66 360 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 LCN10Q6JVE6 187 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 TIPARPQ7Z3E1 657 aaKnown RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 CACNA2D3Q8IZS8 1091 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 SHISA5Q8N114 240 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 IL22RA1Q8N6P7 574 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 OR51Q1Q8NH59 317 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 CEP70Q8NHQ1 597 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ACTRT2Q8TDY3 377 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ADAMTS18Q8TE60 1221 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 CT55Q8WUE5 264 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 FKBP10Q96AY3 582 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 METTL2AQ96IZ6 378 aaKnown RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 CATSPER2Q96P56 530 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ELAC2Q9BQ52 826 aaKnown RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 NPLQ9BXD5 320 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 EPN3Q9H201 632 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 LYRM4Q9HD34 91 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ZNF282Q9UDV7 671 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ANGPTL2Q9UKU9 493 aa12.82□□□□□ -0.36
CPNE1-227ENST00000498056 EIF3LQ9Y262 564 aaKnown RBP12.82□□□□□ -0.36
CPNE1-227ENST00000498056 ALDOCP09972 364 aaKnown RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 TACR1P25103 407 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 PCBP4P57723 403 aaKnown RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 FOXL2P58012 376 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 TAS2R50P59544 299 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 STX1BP61266 288 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 OCA2Q04671 838 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 MAP7Q14244 749 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 PTGR1Q14914 329 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 KIAA0040Q15053 153 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 NCF4Q15080 339 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 MINDY4Q4G0A6 757 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 OGFOD2Q6N063 350 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 GALNT18Q6P9A2 607 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 SHISA6Q6ZSJ9 500 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 LARP4Q71RC2 724 aaKnown RBP eCLIP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 GPR180Q86V85 440 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 ZC3H7AQ8IWR0 971 aaKnown RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 TMEM132CQ8N3T6 1108 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 C16orf78Q8WTQ4 265 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 C10orf82Q8WW14 230 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 SLC45A3Q96JT2 553 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 FCRL1Q96LA6 429 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 ZNF578Q96N58 590 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 CCDC28BQ9BUN5 200 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 SOX17Q9H6I2 414 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 WDR41Q9HAD4 459 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 MYNNQ9NPC7 610 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 MKKSQ9NPJ1 570 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 SLC22A11Q9NSA0 550 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 C14orf105Q9NVL8 296 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 AIG1Q9NVV5 245 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 CROTQ9UKG9 612 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 PADI1Q9ULC6 663 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 MRPS33Q9Y291 106 aaKnown RBP12.81□□□□□ -0.36
CPNE1-227ENST00000498056 ATG4BQ9Y4P1 393 aa12.81□□□□□ -0.36
CPNE1-227ENST00000498056 MED19A0JLT2 244 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 UBDO15205 165 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 B4GALT2O60909 372 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 GUCY1B2O75343 617 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 JRKO75564 520 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 LRATO95237 230 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 FHP07954 510 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 G6PDP11413 515 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 PRPS2P11908 318 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 BCKDHAP12694 445 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 ACPPP15309 386 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 JAK1P23458 1154 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 DLSTP36957 453 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 HPCAL1P37235 193 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 STAT5AP42229 794 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 DIO3P55073 304 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 NME5P56597 212 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms