RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 WASHC5Q12768 1159 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 GCKRQ14397 625 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 GK2Q14410 553 aaPredicted RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 C3AR1Q16581 482 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CT45A2Q5DJT8 189 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CEP85LQ5SZL2 805 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CES4AQ5XG92 561 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 NOTCH2NLQ7Z3S9 236 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 ZSCAN30Q86W11 494 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 C17orf64Q86WR6 236 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 STHQ8IWL8 128 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 DND1Q8IYX4 353 aaKnown RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 BATF2Q8N1L9 274 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 ZNF619Q8N2I2 560 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 OR5M9Q8NGP3 310 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 RPLP0P6Q8NHW5 317 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 C8orf46Q8TAG6 207 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 EXOC6Q8TAG9 804 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 URGCPQ8TCY9 931 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 CD99L2Q8TCZ2 262 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 UBTD2Q8WUN7 234 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 SLC13A3Q8WWT9 602 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 PRCCQ92733 491 aaPredicted RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 SLCO2A1Q92959 643 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 WBP2Q969T9 261 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 SSX3Q99909 188 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 NUSAP1Q9BXS6 441 aaKnown RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 DDX47Q9H0S4 455 aaKnown RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 TRPV6Q9H1D0 765 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 ZNF665Q9H7R5 613 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 UBE2TQ9NPD8 197 aaPredicted RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 B3GAT2Q9NPZ5 323 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 PIGVQ9NUD9 493 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 STRAPQ9Y3F4 350 aaKnown RBP3.45□□□□□ -1.86
SMC4-225ENST00000497203 WIPI2Q9Y4P8 454 aa3.45□□□□□ -1.86
SMC4-225ENST00000497203 NEDD4P46934 1319 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 DHX29Q7Z478 1369 aaKnown RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 LMO7DNF2Z398 122 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CHEK1O14757 476 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 OGTO15294 1046 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 ECE2O60344 883 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 STBD1O95210 358 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CPNE6O95741 557 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 RPLP0P05388 317 aaKnown RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 NUDT17P0C025 328 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CCDC192P0DO97 292 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 PRKACGP22612 351 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 GJB2P29033 226 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 OR1D2P34982 312 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 ATP12AP54707 1039 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 SLC12A3P55017 1021 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 YBEYP58557 167 aaPredicted RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 STARD6P59095 220 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 SSTP61278 116 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 ERVK-16P61578 105 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CCZ1BP86790 482 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CCZ1P86791 482 aaPredicted RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 PMP22Q01453 160 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 DHODHQ02127 395 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 MEF2DQ14814 521 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 MTF1Q14872 753 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 KRT31Q15323 416 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 RFTN2Q52LD8 501 aaPredicted RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 PARP10Q53GL7 1025 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 TOR1AIP1Q5JTV8 583 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 KIF6Q6ZMV9 814 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 FRRS1Q6ZNA5 592 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CATSPERDQ86XM0 798 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 HDDC3Q8N4P3 179 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 LEMD2Q8NC56 503 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CCDC197Q8NCU1 140 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 ADAD2Q8NCV1 583 aaKnown RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 NUP37Q8NFH4 326 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 NEK11Q8NG66 645 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 OR10G7Q8NGN6 311 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 OR4A16Q8NH70 328 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 SMPDL3AQ92484 453 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 GLYATL1Q969I3 302 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 DTD2Q96FN9 168 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 NSMCE3Q96MG7 304 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 FAM218AQ96MZ4 157 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 PKP2Q99959 881 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 OVOL2Q9BRP0 275 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 NTMT1Q9BV86 223 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 GANQ9H2C0 597 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 FNDC4Q9H6D8 234 aaPredicted RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 SYTL2Q9HCH5 934 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 KCNMB3Q9NPA1 279 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 SPHK2Q9NRA0 654 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 BARHL2Q9NY43 387 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 NLGN3Q9NZ94 848 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 KLK11Q9UBX7 282 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 FETUBQ9UGM5 382 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 CCPG1Q9ULG6 757 aa3.44□□□□□ -1.86
SMC4-225ENST00000497203 MRPS2Q9Y399 296 aaKnown RBP3.44□□□□□ -1.86
SMC4-225ENST00000497203 LOC105371242A0A075B767 164 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 A0A087X002 238 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 ARHGAP42A6NI28 874 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 TLR4O00206 839 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 EEF2KO00418 725 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms