RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	CA13	Q8N1Q1	262 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	OR2Y1	Q8NGV0	311 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	OR51Q1	Q8NH59	317 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	MGARP	Q8TDB4	240 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	ADAMTS17	Q8TE56	1095 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	SELENOM	Q8WWX9	145 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	RGMA	Q96B86	450 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	KCNC2	Q96PR1	638 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	SORT1	Q99523	831 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	SERPINI1	Q99574	410 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	MESP1	Q9BRJ9	268 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	TBCD	Q9BTW9	1192 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	TUBB1	Q9H4B7	451 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	ELOVL6	Q9H5J4	265 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	BRF2	Q9HAW0	419 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.23	□□□□□ -0.61
APTX-233	ENST00000496030	LANCL2	Q9NS86	450 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.23	□□□□□ -0.61
APTX-233	ENST00000496030	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.23	□□□□□ -0.61
APTX-233	ENST00000496030	CCL27	Q9Y4X3	112 aa		11.23	□□□□□ -0.61
APTX-233	ENST00000496030	OR2W5	A6NFC9	320 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	FAM227A	F5H4B4	570 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	AZIN1	O14977	448 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	ATP8B1	O43520	1251 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	EED	O75530	441 aa	Known RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	SEMA3D	O95025	777 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	UROS	P10746	265 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	HIST1H1T	P22492	207 aa	Predicted RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	GRK2	P25098	689 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	CERS1	P27544	350 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	HMOX2	P30519	316 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	HPD	P32754	393 aa	Predicted RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	CASR	P41180	1078 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	XCR1	P46094	333 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	ZNF33B	Q06732	778 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	KLC1	Q07866	573 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	BST1	Q10588	318 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	ERV3-1	Q14264	604 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	CRTC2	Q53ET0	693 aa	Predicted RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	ATP1A1-AS1	Q5TC04	95 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	KANK2	Q63ZY3	851 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	OR4C11	Q6IEV9	310 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	NIPAL1	Q6NVV3	410 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	TRIM40	Q6P9F5	258 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	SCIMP	Q6UWF3	145 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	SHISA6	Q6ZSJ9	500 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	TRIM46	Q7Z4K8	759 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	ACOT4	Q8N9L9	421 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	STARD8	Q92502	1023 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	C11orf24	Q96F05	449 aa	Predicted RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	SERINC2	Q96SA4	455 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	PAIP2	Q9BPZ3	127 aa	Known RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	EFHD1	Q9BUP0	239 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	NPL	Q9BXD5	320 aa	Predicted RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	ACPT	Q9BZG2	426 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	DDX31	Q9H8H2	851 aa	Known RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	NKIRAS1	Q9NYS0	192 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	GPN3	Q9UHW5	284 aa	Predicted RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	ZDHHC2	Q9UIJ5	367 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	PTRH2	Q9Y3E5	179 aa	Known RBP	11.22	□□□□□ -0.61
APTX-233	ENST00000496030	TRAF6	Q9Y4K3	522 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030	DNAJC15	Q9Y5T4	150 aa		11.22	□□□□□ -0.61
APTX-233	ENST00000496030		A0A0A6YYD5	115 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	TMEM114	B3SHH9	223 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	CYR61	O00622	381 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	SNN	O75324	88 aa	Predicted RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	CD63	P08962	238 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	HSD3B1	P14060	373 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	HSD3B2	P26439	372 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	SLC1A6	P48664	564 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	MTTP	P55157	894 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	LIM2	P55344	173 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	ABCE1	P61221	599 aa	Known RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	CSTF3	Q12996	717 aa	Known RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	STX3	Q13277	289 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	UGT8	Q16880	541 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	AP5B1	Q2VPB7	878 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	MRM1	Q6IN84	353 aa	Known RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	RNF165	Q6ZSG1	346 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030		Q6ZSR9	355 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	PPP1R32	Q7Z5V6	425 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	PRSS58	Q8IYP2	241 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	CLYBL	Q8N0X4	340 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	METTL4	Q8N3J2	472 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	GOLGA6L1	Q8N7Z2	621 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	GBP7	Q8N8V2	638 aa	Predicted RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	SRFBP1	Q8NEF9	429 aa	Known RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	CHTF18	Q8WVB6	975 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	MIEF2	Q96C03	454 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	PEX11G	Q96HA9	241 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	FAR2	Q96K12	515 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	MAPKAP1	Q9BPZ7	522 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	MRPL1	Q9BYD6	325 aa	Known RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	SOX17	Q9H6I2	414 aa	Predicted RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	EML4	Q9HC35	981 aa	Known RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	VPS29	Q9UBQ0	182 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	HAO1	Q9UJM8	370 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	NXT1	Q9UKK6	140 aa	Known RBP	11.21	□□□□□ -0.61
APTX-233	ENST00000496030	SLC12A4	Q9UP95	1085 aa		11.21	□□□□□ -0.61
APTX-233	ENST00000496030	ASB4	Q9Y574	426 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms