RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 RAB38P57729 211 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 OR4D2P58180 307 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 DNAJB13P59910 316 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 Q0VFX4 171 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 AIMP2Q13155 320 aaKnown RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 SLC13A2Q13183 592 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 SLAMF1Q13291 335 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 PCLAFQ15004 111 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 PCOLCEQ15113 449 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 GGTA1PQ4G0N0 100 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 SFT2D3Q587I9 215 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 IRAK1BP1Q5VVH5 260 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 LIPMQ5VYY2 423 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 SCIMPQ6UWF3 145 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 LRIG3Q6UXM1 1119 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 ASB18Q6ZVZ8 466 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 NDUFAF7Q7L592 441 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 CLNKQ7Z7G1 428 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 EXOC3L1Q86VI1 746 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 EFCAB3Q8N7B9 438 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 TMEM52Q8NDY8 209 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 PLPP5Q8NEB5 264 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 KCNA7Q96RP8 456 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 ZNF382Q96SR6 550 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 SERPINI1Q99574 410 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 MRPL1Q9BYD6 325 aaKnown RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 ROGDIQ9GZN7 287 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 CLK4Q9HAZ1 481 aaKnown RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 KCNK9Q9NPC2 374 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 NECTIN3Q9NQS3 549 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 PRTFDC1Q9NRG1 225 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 C19orf25Q9UFG5 118 aaPredicted RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 TUBD1Q9UJT1 453 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 DAPP1Q9UN19 280 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 SNX6Q9UNH7 406 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 SLC12A4Q9UP95 1085 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 MRPS33Q9Y291 106 aaKnown RBP9.24□□□□□ -0.93
CALD1-223ENST00000496024 TSC22D4Q9Y3Q8 395 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 TIMM22Q9Y584 194 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 CROCCQ5TZA2 2017 aa9.24□□□□□ -0.93
CALD1-223ENST00000496024 NBASA2RRP1 2371 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 ZNF462Q96JM2 2506 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 LOC102723996A0A087X1L8 192 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 WDR91A4D1P6 747 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 UBFD1O14562 309 aaKnown RBP9.23□□□□□ -0.93
CALD1-223ENST00000496024 CTIFO43310 598 aaKnown RBP9.23□□□□□ -0.93
CALD1-223ENST00000496024 TRIM13O60858 407 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 CEACAM4O75871 244 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 KRT6AP02538 564 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 KRT6BP04259 564 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 CHN1P15882 459 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 CPN2P22792 545 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 SERPINB3P29508 390 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 ALDH3A1P30838 453 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 BSGP35613 385 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 KRT6CP48668 564 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 HTR6P50406 440 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 PKNOX1P55347 436 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 ID2Q02363 134 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 CUL3Q13618 768 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 RCN2Q14257 317 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 MYBPC3Q14896 1274 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 TCTN3Q6NUS6 607 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 PAPD4Q6PIY7 484 aaKnown RBP9.23□□□□□ -0.93
CALD1-223ENST00000496024 CYP20A1Q6UW02 462 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 QSOX2Q6ZRP7 698 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 ZCCHC23Q6ZST2 131 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 FRMD7Q6ZUT3 714 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 KBTBD2Q8IY47 623 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 ZNF843Q8N446 348 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 MYRIPQ8NFW9 859 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 AGAP11Q8TF27 550 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 TUBB6Q9BUF5 446 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 GATA5Q9BWX5 397 aaPredicted RBP9.23□□□□□ -0.93
CALD1-223ENST00000496024 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 SLC29A3Q9BZD2 475 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 ZNF700Q9H0M5 742 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 LYRM4Q9HD34 91 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 PRDM9Q9NQV7 894 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 PNO1Q9NRX1 252 aaKnown RBP9.23□□□□□ -0.93
CALD1-223ENST00000496024 RIC8BQ9NVN3 520 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 KCMF1Q9P0J7 381 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 SENP1Q9P0U3 644 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 STK38LQ9Y2H1 464 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 FIS1Q9Y3D6 152 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 PCDHGA9Q9Y5G4 932 aaKnown RBP9.23□□□□□ -0.93
CALD1-223ENST00000496024 SPACA6W5XKT8 324 aa9.23□□□□□ -0.93
CALD1-223ENST00000496024 RP1L1Q8IWN7 2480 aaPredicted RBP9.22□□□□□ -0.93
CALD1-223ENST00000496024 ARHGAP10A1A4S6 786 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 GLOD5A6NK44 160 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 TGFBR3LH3BV60 316 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 CYR61O00622 381 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 CLDN4O14493 209 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 PCDH17O14917 1159 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 TYROBPO43914 113 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 TMPRSS11DO60235 418 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 LDB3O75112 727 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 ULK1O75385 1050 aa9.22□□□□□ -0.93
CALD1-223ENST00000496024 PRKRAO75569 313 aaKnown RBP9.22□□□□□ -0.93
CALD1-223ENST00000496024 ESRRBO95718 433 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms