RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	L3MBTL4	Q8NA19	623 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	FAM47B	Q8NA70	645 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	ARMC2	Q8NEN0	867 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	HUS1B	Q8NHY5	278 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	FAR1	Q8WVX9	515 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	TAAR6	Q96RI8	345 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	CSF3R	Q99062	836 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	MAPKAP1	Q9BPZ7	522 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	ROGDI	Q9GZN7	287 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	OR51B5	Q9H339	312 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	IPPK	Q9H8X2	491 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	ACTR8	Q9H981	624 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	L2HGDH	Q9H9P8	463 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	COPS7B	Q9H9Q2	264 aa	Predicted RBP	10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	LYRM4	Q9HD34	91 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	DMRT3	Q9NQL9	472 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	PRTFDC1	Q9NRG1	225 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	AGPAT4	Q9NRZ5	378 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	XPR1	Q9UBH6	696 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	PPIE	Q9UNP9	301 aa	Known RBP	10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	RNF11	Q9Y3C5	154 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	PCDHGA11	Q9Y5H2	935 aa		10.25	□□□□□ -0.77
DCTN1-223	ENST00000495643	ANKUB1	A6NFN9	424 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	RTCA	O00442	366 aa	Known RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	OR7A17	O14581	309 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	PRAMEF2	O60811	474 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	CTNS	O60931	367 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SEMA7A	O75326	666 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SH3BGRL	O75368	114 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	MYBL2	P10244	700 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	HIST1H1T	P22492	207 aa	Predicted RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	EEF1D	P29692	281 aa	Known RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	CD96	P40200	585 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	GPR143	P51810	404 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SLC13A2	Q13183	592 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	TUBA3C	Q13748	450 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	RCN2	Q14257	317 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SLC29A2	Q14542	456 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	INA	Q16352	499 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	AP5B1	Q2VPB7	878 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	FHL5	Q5TD97	284 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	LGSN	Q5TDP6	509 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	OR4C11	Q6IEV9	310 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	TUBA3E	Q6PEY2	450 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	MYLK4	Q86YV6	388 aa	Predicted RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	ARMC10	Q8N2F6	343 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SLC5A8	Q8N695	610 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	EIF1AD	Q8N9N8	165 aa	Known RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	APCDD1L	Q8NCL9	501 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	ST6GALNAC3	Q8NDV1	305 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	WDR20	Q8TBZ3	569 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	MTBP	Q96DY7	904 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	PHF21B	Q96EK2	531 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SCYL1	Q96KG9	808 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SIGLEC12	Q96PQ1	595 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	MTERF1	Q99551	399 aa	Known RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	SLX1A	Q9BQ83	275 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	MRPL57	Q9BQC6	102 aa	Known RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	MRPL46	Q9H2W6	279 aa	Known RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	CDCP1	Q9H5V8	836 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	ZBTB26	Q9HCK0	441 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	PSD3	Q9NYI0	1048 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	FETUB	Q9UGM5	382 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	PCTP	Q9UKL6	214 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	MRPS33	Q9Y291	106 aa	Known RBP	10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	PCDHGB6	Q9Y5F9	930 aa		10.24	□□□□□ -0.77
DCTN1-223	ENST00000495643	POLE	Q07864	2286 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	FOXE1	O00358	373 aa	Predicted RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	SAP18	O00422	153 aa	Known RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	PLPP1	O14494	284 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	CDK2AP1	O14519	115 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	SMIM24	O75264	130 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	MYO1D	O94832	1006 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	CLDN9	O95484	217 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	EDN3	P14138	238 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	PTX3	P26022	381 aa	Predicted RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	PPP2R1B	P30154	601 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	ST13	P50502	369 aa	Known RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	ARFIP1	P53367	373 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	MLF1	P58340	268 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	TAS2R50	P59544	299 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	RPS13	P62277	151 aa	Known RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	TRAF3	Q13114	568 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	DDX39B	Q13838	428 aa	Known RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	ZRSR2	Q15696	482 aa	Known RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	CPSF6	Q16630	551 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	FAM180A	Q6UWF9	173 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	CLNK	Q7Z7G1	428 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	RPS19BP1	Q86WX3	136 aa	Known RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	ZGRF1	Q86YA3	2104 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	GSPT2	Q8IYD1	628 aa	Known RBP	10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	MDS2	Q8NDY4	140 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	B3GNT7	Q8NFL0	401 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	OR52B6	Q8NGF0	335 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	PRR7	Q8TB68	274 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	MZB1	Q8WU39	189 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	RGMA	Q96B86	450 aa		10.23	□□□□□ -0.77
DCTN1-223	ENST00000495643	REPS1	Q96D71	796 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms