RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 CRLF3Q8IUI8 442 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 CYP4X1Q8N118 509 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 BEST3Q8N1M1 668 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 AMER2Q8N7J2 671 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 L3MBTL4Q8NA19 623 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 DNAJB8Q8NHS0 232 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 MTBPQ96DY7 904 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 NPAS2Q99743 824 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 SLX1AQ9BQ83 275 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
MRPL55-232ENST00000495434 IPPKQ9H8X2 491 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 CPSF2Q9P2I0 782 aaKnown RBP13.13□□□□□ -0.31
MRPL55-232ENST00000495434 FETUBQ9UGM5 382 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 CLDN16Q9Y5I7 305 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 HECTD1Q9ULT8 2610 aa13.13□□□□□ -0.31
MRPL55-232ENST00000495434 ZGRF1Q86YA3 2104 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 EXOC1LA0A1B0GW35 172 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 FOXE1O00358 373 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-232ENST00000495434 RIPK2O43353 540 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 CTNSO60931 367 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 AGFG2O95081 481 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 DDAH2O95865 285 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 TGFB1P01137 390 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-232ENST00000495434 PTX3P26022 381 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-232ENST00000495434 CERS1P27544 350 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 PHEXP78562 749 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 SLC13A2Q13183 592 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 TUBA3CQ13748 450 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 FCRLBQ6BAA4 426 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 OR4C11Q6IEV9 310 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 TUBA3EQ6PEY2 450 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 ZNF793Q6ZN11 406 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 RPS19BP1Q86WX3 136 aaKnown RBP13.12□□□□□ -0.31
MRPL55-232ENST00000495434 HORMAD2Q8N7B1 307 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 ACOT4Q8N9L9 421 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 APCDD1LQ8NCL9 501 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 B3GNT7Q8NFL0 401 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 RGMAQ96B86 450 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 MAGEB10Q96LZ2 347 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-232ENST00000495434 PSMG3-AS1Q96PY0 264 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 UTP23Q9BRU9 249 aaKnown RBP13.12□□□□□ -0.31
MRPL55-232ENST00000495434 CENPKQ9BS16 269 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 NTMT1Q9BV86 223 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 TXLNGYQ9BZA5 131 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
MRPL55-232ENST00000495434 ACTR8Q9H981 624 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 ADAP2Q9NPF8 381 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 OLAHQ9NV23 265 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 ZNF358Q9NW07 568 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 MS4A12Q9NXJ0 267 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 PPT2Q9UMR5 302 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 SPACA6W5XKT8 324 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 SVILO95425 2214 aa13.12□□□□□ -0.31
MRPL55-232ENST00000495434 USP9YO00507 2555 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 LRRC14BA6NHZ5 514 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 SMIM24O75264 130 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 RASAL1O95294 804 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 SIX3O95343 332 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 F10P00742 488 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 CRYABP02511 175 aaKnown RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 GCAP28676 217 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 EEF1DP29692 281 aaKnown RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 CD96P40200 585 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 CLCN2P51788 898 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 HNRNPFP52597 415 aaKnown RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 CUL3Q13618 768 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 SERTAD2Q14140 314 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 ZNF766Q5HY98 468 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 C10orf62Q5T681 223 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 TMEM132CQ8N3T6 1108 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 PTGR2Q8N8N7 351 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 FAM47BQ8NA70 645 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 MDS2Q8NDY4 140 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 TMEM52Q8NDY8 209 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 UHMK1Q8TAS1 419 aaKnown RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 WDR20Q8TBZ3 569 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 SSC4DQ8WTU2 575 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 NR4A3Q92570 626 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 PHF21BQ96EK2 531 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 SCYL1Q96KG9 808 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 TAAR6Q96RI8 345 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 CSF3RQ99062 836 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 CDCP1Q9H5V8 836 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-232ENST00000495434 DMRT3Q9NQL9 472 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 XPR1Q9UBH6 696 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 VTI1BQ9UEU0 232 aa13.11□□□□□ -0.31
MRPL55-232ENST00000495434 WIPF3A6NGB9 483 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 GABRR3A8MPY1 467 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 A8MUA0 341 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 TGFBR3LH3BV60 316 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 FCHO1O14526 889 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 SEMA7AO75326 666 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 MYO1DO94832 1006 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms