RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 FTSJ1Q9UET6 329 aa10.46□□□□□ -0.73
PKP4-215ENST00000494945 BTNL2Q9UIR0 455 aa10.46□□□□□ -0.73
PKP4-215ENST00000494945 ATXN7L1Q9ULK2 861 aaPredicted RBP10.46□□□□□ -0.73
PKP4-215ENST00000494945 PCDHGA7Q9Y5G6 932 aa10.46□□□□□ -0.73
PKP4-215ENST00000494945 GPR179Q6PRD1 2367 aa10.46□□□□□ -0.74
PKP4-215ENST00000494945 PRSS51A0A1B0GVH4 220 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 C1orf226A1L170 272 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 RNASET2O00584 256 aaKnown RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 NTN3O00634 580 aaPredicted RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 CDX4O14627 284 aaPredicted RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 FOXD2O60548 495 aaPredicted RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 GALR3O60755 368 aaPredicted RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 SCN2BO60939 215 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 CD59P13987 128 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 NBL1P41271 181 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 SEPHS1P49903 392 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 WNT3P56703 355 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 MC1RQ01726 317 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 SPEM2Q0P670 501 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 FAM53BQ14153 422 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 GRM7Q14831 915 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 SPATS1Q496A3 300 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 DEFB134Q4QY38 66 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 C6orf10Q5SRN2 563 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 LRIF1Q5T3J3 769 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 NDUFAF5Q5TEU4 345 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 DLEU7Q6UYE1 221 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 ZNF574Q6ZN55 896 aaPredicted RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 DGLUCYQ7Z3D6 616 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 ARHGAP22Q7Z5H3 698 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 ULK2Q8IYT8 1036 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 TTC29Q8NA56 475 aaPredicted RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 FAM47BQ8NA70 645 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 ATOH1Q92858 354 aaPredicted RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 CCDC115Q96NT0 180 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 GFM1Q96RP9 751 aaKnown RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 CDRT15Q96T59 188 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 EDEM2Q9BV94 578 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 CLK4Q9HAZ1 481 aaKnown RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 IL1RL2Q9HB29 575 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 FANCEQ9HB96 536 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 SERHLQ9NQF3 203 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 SEMA4GQ9NTN9 838 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 MS4A12Q9NXJ0 267 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 TAS2R7Q9NYW3 318 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 NCDNQ9UBB6 729 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 ABCD2Q9UBJ2 740 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 DAPP1Q9UN19 280 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 AP3M1Q9Y2T2 418 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 MRPS2Q9Y399 296 aaKnown RBP10.45□□□□□ -0.74
PKP4-215ENST00000494945 PCDHA9Q9Y5H5 950 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 SPACA6W5XKT8 324 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 WDR87Q6ZQQ6 2873 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
PKP4-215ENST00000494945 FRYLO94915 3013 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 IGHV5-10-1A0A0J9YXX1 117 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 A0A1W2PR48 441 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 HYKKA2RU49 373 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 A8MU76 341 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 TMEM150CB9EJG8 249 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 D6RAR5 112 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 H0YHG0 523 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 RFXANKO14593 260 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 PROM1O43490 865 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 OR2B3O76000 313 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 B3GALT4O96024 378 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 LMNAP02545 664 aaKnown RBP10.44□□□□□ -0.74
PKP4-215ENST00000494945 NR2F6P10588 404 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 SLC6A2P23975 617 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 TLX1P31314 330 aaPredicted RBP10.44□□□□□ -0.74
PKP4-215ENST00000494945 BUD31P41223 144 aaPredicted RBP10.44□□□□□ -0.74
PKP4-215ENST00000494945 ALDH9A1P49189 494 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 LIM2P55344 173 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 TNFRSF17Q02223 184 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 TRA2AQ13595 282 aaKnown RBP eCLIP10.44□□□□□ -0.74
PKP4-215ENST00000494945 MUM1Q2TAK8 710 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 FAM214AQ32MH5 1076 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 ZNF385BQ569K4 471 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 PIGGQ5H8A4 983 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 SAMD4BQ5PRF9 694 aaKnown RBP10.44□□□□□ -0.74
PKP4-215ENST00000494945 YOD1Q5VVQ6 348 aaPredicted RBP10.44□□□□□ -0.74
PKP4-215ENST00000494945 ANKRD26P1Q6NSI1 321 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 TLDC1Q6P9B6 456 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 PGM2L1Q6PCE3 622 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 PRR23CQ6ZRP0 262 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 TMPRSS9Q7Z410 1059 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 ANKRD46Q86W74 232 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 TICAM1Q8IUC6 712 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 NAXDQ8IW45 347 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 KIAA2013Q8IYS2 634 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 FBXW8Q8N3Y1 598 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 EFCAB3Q8N7B9 438 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 OR8J3Q8NGG0 315 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 C10orf90Q96M02 699 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 ANKRD27Q96NW4 1050 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 PANX1Q96RD7 426 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 CGREF1Q99674 301 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 SH3GL1Q99961 368 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 MAPKAP1Q9BPZ7 522 aa10.44□□□□□ -0.74
PKP4-215ENST00000494945 SLC39A3Q9BRY0 314 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms