RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 WDR77Q9BQA1 342 aaPredicted RBP10.96□□□□□ -0.65
UBA3-211ENST00000493957 SHCBP1LQ9BZQ2 653 aa10.96□□□□□ -0.65
UBA3-211ENST00000493957 CENPHQ9H3R5 247 aa10.96□□□□□ -0.65
UBA3-211ENST00000493957 COPS7BQ9H9Q2 264 aaPredicted RBP10.96□□□□□ -0.65
UBA3-211ENST00000493957 OXSMQ9NWU1 459 aa10.96□□□□□ -0.65
UBA3-211ENST00000493957 KCMF1Q9P0J7 381 aa10.96□□□□□ -0.65
UBA3-211ENST00000493957 TRPS1Q9UHF7 1281 aa10.96□□□□□ -0.65
UBA3-211ENST00000493957 TIMM22Q9Y584 194 aa10.96□□□□□ -0.65
UBA3-211ENST00000493957 CLDN16Q9Y5I7 305 aa10.96□□□□□ -0.65
UBA3-211ENST00000493957 ZNF462Q96JM2 2506 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 SHANK1Q9Y566 2161 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 CCDC151A5D8V7 595 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 MANBAO00462 879 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 RGS16O15492 202 aaPredicted RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 TYROBPO43914 113 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 TMPRSS11DO60235 418 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 PRKRAO75569 313 aaKnown RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 SCELO95171 688 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 HPP00738 406 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 GBAP04062 536 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 HIST1H1TP22492 207 aaPredicted RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 PPP2R1BP30154 601 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 SERPINB1P30740 379 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 ALDH3A1P30838 453 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 BSGP35613 385 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 RAP1GDS1P52306 607 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 RRADP55042 308 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 HNRNPH2P55795 449 aaKnown RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 DNAJB13P59910 316 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 SKP1P63208 163 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 LCP2Q13094 533 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 LACTB2Q53H82 288 aaPredicted RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 TNFAIP8L3Q5GJ75 292 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 OR4C11Q6IEV9 310 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 NIPAL1Q6NVV3 410 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 BLOC1S3Q6QNY0 202 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 SCIMPQ6UWF3 145 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 FRMD7Q6ZUT3 714 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 CHSY3Q70JA7 882 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 CLNKQ7Z7G1 428 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 EXOC3L1Q86VI1 746 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 CNPY4Q8N129 248 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 GALNT16Q8N428 558 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 PLPP5Q8NEB5 264 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 RDH11Q8TC12 318 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 UCN3Q969E3 161 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 REPS1Q96D71 796 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 TBCDQ9BTW9 1192 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 SLC25A23Q9BV35 468 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 GATA5Q9BWX5 397 aaPredicted RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 MRPL1Q9BYD6 325 aaKnown RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 ZNF700Q9H0M5 742 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 SLC25A18Q9H1K4 315 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 ZBTB20Q9HC78 741 aaPredicted RBP10.95□□□□□ -0.66
UBA3-211ENST00000493957 MLXIPLQ9NP71 852 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 MID1IP1Q9NPA3 183 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 GPR83Q9NYM4 423 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 TUBD1Q9UJT1 453 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 FBXW2Q9UKT8 454 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 DAPP1Q9UN19 280 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 NBASA2RRP1 2371 aa10.95□□□□□ -0.66
UBA3-211ENST00000493957 IGKV3D-11A0A0A0MRZ8 115 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 NSG1A0A0A6YYJ2 146 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 A0A1W2PQ72 361 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 ARHGAP10A1A4S6 786 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 A8MUA0 341 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 PSMD12O00232 456 aaPredicted RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 FOXE1O00358 373 aaPredicted RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 CYR61O00622 381 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 CTIFO43310 598 aaKnown RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 ITGA3P26006 1051 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 CD97P48960 835 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 PHEXP78562 749 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 TGM3Q08188 693 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 IFT88Q13099 833 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 AIMP2Q13155 320 aaKnown RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 SLAMF1Q13291 335 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 MPP2Q14168 576 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 NSDHLQ15738 373 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 AP5B1Q2VPB7 878 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 SFT2D3Q587I9 215 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 LIPMQ5VYY2 423 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 CES4AQ5XG92 561 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 C18orf63Q68DL7 685 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 TCTN3Q6NUS6 607 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 LRIG3Q6UXM1 1119 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 ATG14Q6ZNE5 492 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 QSOX2Q6ZRP7 698 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 ZCCHC23Q6ZST2 131 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 NDUFAF7Q7L592 441 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 CPEB2Q7Z5Q1 589 aaKnown RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 SCUBE1Q8IWY4 988 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 CLEC1AQ8NC01 280 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 SELENOMQ8WWX9 145 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 RGMAQ96B86 450 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 NACC2Q96BF6 587 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 CCDC126Q96EE4 140 aa10.94□□□□□ -0.66
UBA3-211ENST00000493957 THOC3Q96J01 351 aaKnown RBP10.94□□□□□ -0.66
UBA3-211ENST00000493957 PKNOX2Q96KN3 472 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms