RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 A0A0U1RRA0 63 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 K7EPI3 171 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 NDC80O14777 642 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 LRP3O75074 770 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 HEXBP07686 556 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 UMODP07911 640 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 FCARP24071 287 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 KIF5BP33176 963 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 GUCY2DQ02846 1103 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 HNRNPA0Q13151 305 aaKnown RBP5.39□□□□□ -1.55
SMC2-205ENST00000493955 EFTUD2Q15029 972 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMC2-205ENST00000493955 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 RAET1GQ6H3X3 334 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 UNC5DQ6UXZ4 953 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 TRMT1LQ7Z2T5 733 aaKnown RBP5.39□□□□□ -1.55
SMC2-205ENST00000493955 SYVN1Q86TM6 617 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 HSCBQ8IWL3 235 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 ARL6IP6Q8N6S5 226 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 CCDC197Q8NCU1 140 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 OR56B1Q8NGI3 324 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 OR6M1Q8NGM8 313 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 EPYCQ99645 322 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 AGPAT1Q99943 283 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 S100A14Q9HCY8 104 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 TMCC3Q9ULS5 477 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 OR1A2Q9Y585 309 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 TNFRSF18Q9Y5U5 241 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 AP1M2Q9Y6Q5 423 aa5.39□□□□□ -1.55
SMC2-205ENST00000493955 SRRM4A7MD48 611 aaKnown RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 BLOC1S5-TXNDC5H3BN57 136 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 CPLX1O14810 134 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 P2RX6O15547 441 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 ECE2O60344 883 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 LMX1BO60663 402 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 KHDRBS3O75525 346 aaKnown RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 AKR7A3O95154 331 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 DNAJB1P25685 340 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 CCKARP32238 428 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 SOX3P41225 446 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 RPL36AP83881 106 aaKnown RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 HSPA14Q0VDF9 509 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 DPYSQ14117 519 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 MEF2DQ14814 521 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 CEBPEQ15744 281 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 FAM76BQ5HYJ3 339 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 STPG1Q5TH74 334 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 LSMEM2Q8N112 164 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 OR4L1Q8NH43 312 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 SMAP2Q8WU79 429 aaPredicted RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 CHURC1Q8WUH1 139 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 RAB39BQ96DA2 213 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 MRPL53Q96EL3 112 aaKnown RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 ZNF274Q96GC6 653 aaPredicted RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 CXorf58Q96LI9 332 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 UHRF2Q96PU4 802 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 RWDD1Q9H446 243 aaPredicted RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 C3orf14Q9HBI5 128 aa5.38□□□□□ -1.55
SMC2-205ENST00000493955 MRTO4Q9UKD2 239 aaKnown RBP5.38□□□□□ -1.55
SMC2-205ENST00000493955 RNF123Q5XPI4 1314 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 PMS2P5A8MQ11 134 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 CHEK1O14757 476 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 PCDH7O60245 1069 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 SMPD2O60906 423 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 IFNB1P01574 187 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 HMBSP08397 361 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 PRSS56P0CW18 603 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 TPBGLP0DKB5 382 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 CEACAM1P13688 526 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 HSPA1LP34931 641 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 ALDH3B1P43353 468 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 LEPRP48357 1165 aaKnown RBP5.37□□□□□ -1.55
SMC2-205ENST00000493955 CCL11P51671 97 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 HSD17B7P56937 341 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 SLC26A5P58743 744 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 BTG1P62324 171 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 CSNK2BP67870 215 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 MFGE8Q08431 387 aaPredicted RBP5.37□□□□□ -1.55
SMC2-205ENST00000493955 TAF7Q15545 349 aaPredicted RBP5.37□□□□□ -1.55
SMC2-205ENST00000493955 TAB1Q15750 504 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 SPANXN4Q5MJ08 99 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 OLFM4Q6UX06 510 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 CNBD1Q8NA66 436 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 OR4D10Q8NGI6 311 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 DQX1Q8TE96 717 aaKnown RBP5.37□□□□□ -1.55
SMC2-205ENST00000493955 U2AF1L4Q8WU68 220 aaKnown RBP5.37□□□□□ -1.55
SMC2-205ENST00000493955 ARHGAP45Q92619 1136 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 SYAP1Q96A49 352 aaPredicted RBP5.37□□□□□ -1.55
SMC2-205ENST00000493955 C16orf58Q96GQ5 468 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 RPGRIP1Q96KN7 1286 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 FUNDC2Q9BWH2 189 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 DPH5Q9H2P9 285 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 CLIP2Q9UDT6 1046 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 WDR37Q9Y2I8 494 aa5.37□□□□□ -1.55
SMC2-205ENST00000493955 NEDD4P46934 1319 aa5.36□□□□□ -1.55
SMC2-205ENST00000493955 hCG_38984A0A1B0GV85 526 aa5.36□□□□□ -1.55
SMC2-205ENST00000493955 TMEM89A2RUT3 159 aa5.36□□□□□ -1.55
SMC2-205ENST00000493955 CCSO14618 274 aa5.36□□□□□ -1.55
SMC2-205ENST00000493955 NOL3O60936 208 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms