RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 SPHK1Q9NYA1 384 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 SPATA7Q9P0W8 599 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 ZDHHC2Q9UIJ5 367 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 ZNF225Q9UK10 706 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 SH2B3Q9UQQ2 575 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 ANGPTL3Q9Y5C1 460 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 RNF215Q9Y6U7 377 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 CEP295Q9C0D2 2601 aa6.29□□□□□ -1.4
TRA2B-216ENST00000493864 AKAP13Q12802 2813 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 LY6G6EA0A0G2JKS1 128 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 LNP1A1A4G5 178 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 UBE2QL1A1L167 161 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 TMEM233B4DJY2 109 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 YKT6O15498 198 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 B4GAT1O43505 415 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 AKAP10O43572 662 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 EDF1O60869 148 aaKnown RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 SHOX2O60902 331 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 OR4F21O95013 312 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CHRM5P08912 532 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 TYRP1P17643 537 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 POLR2CP19387 275 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 TGM1P22735 817 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 PSMB5P28074 263 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 SERPINB3P29508 390 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 PEBP1P30086 187 aaKnown RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 SHMT2P34897 504 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CASRP41180 1078 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 FASLGP48023 281 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CCT8P50990 548 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CCNG1P51959 295 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 SLC16A1P53985 500 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 ATXN3P54252 364 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 OR1D5P58170 312 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 ERVPABLB-1P60509 514 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 TBPL1P62380 186 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 HHEXQ03014 270 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 DUSP2Q05923 314 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CDC16Q13042 620 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 BIRC2Q13490 618 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 DOC2AQ14183 400 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 TUBB8Q3ZCM7 444 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 C19orf54Q5BKX5 351 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CAPN13Q6MZZ7 669 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 METTL2BQ6P1Q9 378 aaKnown RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 GPRIN3Q6ZVF9 776 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 LRRC70Q7Z2Q7 622 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 ADGRE4PQ86SQ3 457 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 AMIGO1Q86WK6 493 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CRLF3Q8IUI8 442 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CMTM4Q8IZR5 234 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 ZNF781Q8N8C0 355 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 DCBLD1Q8N8Z6 715 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 OR52B6Q8NGF0 335 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 OR5M3Q8NGP4 307 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 OR2A1Q8NGT9 310 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 OR4C6Q8NH72 309 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 HMGCLL1Q8TB92 370 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 AGR3Q8TD06 166 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 ATP6V1E2Q96A05 226 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 SH3KBP1Q96B97 665 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 THOC1Q96FV9 657 aaKnown RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CHMP6Q96FZ7 201 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 KCNA7Q96RP8 456 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 TRMOQ9BU70 441 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 BDH2Q9BUT1 245 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 TWSG1Q9GZX9 223 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 FAM107BQ9H098 131 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 ILKAPQ9H0C8 392 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 MID1IP1Q9NPA3 183 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 CCDC177Q9NQR7 707 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 RXFP3Q9NSD7 469 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 POT1Q9NUX5 634 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 NLGN3Q9NZ94 848 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 LRIT1Q9P2V4 623 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 PADI4Q9UM07 663 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 BTBD3Q9Y2F9 522 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 RNF11Q9Y3C5 154 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 RAP2CQ9Y3L5 183 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 U3KQA8 63 aa6.28□□□□□ -1.4
TRA2B-216ENST00000493864 SNRNP200O75643 2136 aaKnown RBP6.28□□□□□ -1.4
TRA2B-216ENST00000493864 SPEGQ15772 3267 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 TPRP12270 2363 aaKnown RBP6.27□□□□□ -1.41
TRA2B-216ENST00000493864 PIPSLA2A3N6 862 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 CPED1A4D0V7 1026 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 PMS2P1A4D2B8 440 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 RHPN2P1A8MT19 583 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 ISM1B1AKI9 464 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 CDX4O14627 284 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-216ENST00000493864 CLGNO14967 610 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 CASC3O15234 703 aaKnown RBP6.27□□□□□ -1.41
TRA2B-216ENST00000493864 GPR42O15529 346 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 IL33O95760 270 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 MLYCDO95822 493 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 PROS1P07225 676 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 FGF4P08620 206 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 C1GALT1C1LP0DN25 315 aa6.27□□□□□ -1.41
TRA2B-216ENST00000493864 ALPPL2P10696 532 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms