RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 OR1C1Q15619 314 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 UBE3DQ7Z6J8 389 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 MDS2Q8NDY4 140 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 C5orf34Q96MH7 638 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 PCDHGA11Q9Y5H2 935 aa25.36■■□□□ 1.65
SH3GL3-204ENST00000492099 UGDHO60701 494 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 MYO1DO94832 1006 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 TGFB1P01137 390 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 PIK3CBP42338 1070 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 AP5B1Q2VPB7 878 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 TECRLQ5HYJ1 363 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 MYLK4Q86YV6 388 aaPredicted RBP25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 PLD6Q8N2A8 252 aaKnown RBP25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 TMEM52Q8NDY8 209 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 B3GNT7Q8NFL0 401 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 TRIM44Q96DX7 344 aaPredicted RBP25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 SIGLEC12Q96PQ1 595 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 DEFB126Q9BYW3 111 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 ACTR8Q9H981 624 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 PNO1Q9NRX1 252 aaKnown RBP25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 ANKRD10Q9NXR5 420 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 CPSF2Q9P2I0 782 aaKnown RBP25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 TSC22D4Q9Y3Q8 395 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 SPACA6W5XKT8 324 aa25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 SPTAN1Q13813 2472 aaKnown RBP25.35■■□□□ 1.65
SH3GL3-204ENST00000492099 WIPF3A6NGB9 483 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 POC1B-GALNT4F8VUJ3 575 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 CTNSO60931 367 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 COL6A2P12110 1019 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 CD46P15529 392 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 ATP5A1P25705 553 aaKnown RBP25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 CLCN2P51788 898 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 TDGF1P3P51864 188 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 HNRNPFP52597 415 aaKnown RBP25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 OC90Q02509 493 aaPredicted RBP25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 TSNAXIP1Q2TAA8 658 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 DEPDC1Q5TB30 811 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 KHDRBS2Q5VWX1 349 aaKnown RBP25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 IFT20Q8IY31 132 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 ACOT4Q8N9L9 421 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 REPS1Q96D71 796 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 CSF3RQ99062 836 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 CENPKQ9BS16 269 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 ADAP2Q9NPF8 381 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 KCMF1Q9P0J7 381 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 TMCO1Q9UM00 188 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 PPIEQ9UNP9 301 aaKnown RBP25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 OSGIN2Q9Y236 505 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 CLDN16Q9Y5I7 305 aa25.34■■□□□ 1.65
SH3GL3-204ENST00000492099 SCELO95171 688 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 LDLRP01130 860 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 HIST1H1TP22492 207 aaPredicted RBP25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 MLF1P58340 268 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 GTF2H2Q13888 395 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 SPINK14Q6IE38 97 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 GTF2H2CQ6P1K8 395 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 ZNF793Q6ZN11 406 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 ARMC10Q8N2F6 343 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 TMEM178AQ8NBL3 297 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 APCDD1LQ8NCL9 501 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 C7orf57Q8NEG2 295 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 HUS1BQ8NHY5 278 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 UHMK1Q8TAS1 419 aaKnown RBP25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 DCAKDQ8WVC6 231 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 SCMH1Q96GD3 660 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 IPPKQ9H8X2 491 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 LRFN1Q9P244 771 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 NFU1Q9UMS0 254 aa25.33■■□□□ 1.65
SH3GL3-204ENST00000492099 SPTBN1Q01082 2364 aaKnown RBP25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 H0YIV9 168 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 TGFBR3LH3BV60 316 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 FCHO1O14526 889 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 RNF224P0DH78 156 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 TPP2P29144 1249 aaPredicted RBP25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 SSR2P43308 183 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 PHEXP78562 749 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 DDX39BQ13838 428 aaKnown RBP25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 C4orf17Q53FE4 359 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 LGSNQ5TDP6 509 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 GOLGA7Q7Z5G4 137 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 CLNKQ7Z7G1 428 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 VMP1Q96GC9 406 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 OR51B5Q9H339 312 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 ZNF358Q9NW07 568 aa25.32■■□□□ 1.64
SH3GL3-204ENST00000492099 SVILO95425 2214 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 LRRC14BA6NHZ5 514 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 RTCAO00442 366 aaKnown RBP25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 SH3BGRLO75368 114 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 NEURL1O76050 574 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 SIX3O95343 332 aaPredicted RBP25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 ABHD2P08910 425 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 EEF1DP29692 281 aaKnown RBP25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 CYB561P49447 251 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 ARFIP1P53367 373 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 STX4Q12846 297 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 ELAVL1Q15717 326 aaKnown RBP25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 OR4C11Q6IEV9 310 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 TMEM132CQ8N3T6 1108 aa25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 PTGR2Q8N8N7 351 aaPredicted RBP25.31■■□□□ 1.64
SH3GL3-204ENST00000492099 L3MBTL4Q8NA19 623 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms