RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 MFSD9Q8NBP5 474 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 SRFBP1Q8NEF9 429 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 ARMC2Q8NEN0 867 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 MMABQ96EY8 250 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 FAM111AQ96PZ2 611 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 TAAR6Q96RI8 345 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 MACROD1Q9BQ69 325 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 SLX1AQ9BQ83 275 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 CENPKQ9BS16 269 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 NTMT1Q9BV86 223 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 SARGQ9BW04 601 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 YIPF2Q9BWQ6 316 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 C1QTNF3Q9BXJ4 246 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 NOL11Q9H8H0 719 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 EML4Q9HC35 981 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 ZFP69BQ9UJL9 534 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 OSGIN2Q9Y236 505 aa10.4□□□□□ -0.74
TMEM39A-211ENST00000491685 NSG1A0A0A6YYJ2 146 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 IGHV3-20A0A0C4DH32 117 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 FEZF1A0PJY2 475 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 A8MT66 165 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 CRCPO75575 148 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 WFS1O76024 890 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 SNUPNO95149 360 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 SIX3O95343 332 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 SERPIND1P05546 499 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 ITGAMP11215 1152 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 ICAM2P13598 275 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 TDGF1P3P51864 188 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 NAGLUP54802 743 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 PER3P56645 1201 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 MAGOHP61326 146 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 STXBP1P61764 594 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 DOC2AQ14183 400 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 TLR1Q15399 786 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 FBXO48Q5FWF7 155 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 LIPMQ5VYY2 423 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 LANCL3Q6ZV70 420 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 CHSY3Q70JA7 882 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 NDUFAF7Q7L592 441 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 GOLGA7Q7Z5G4 137 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 TRIM42Q8IWZ5 723 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 KBTBD2Q8IY47 623 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 OR9A4Q8NGU2 314 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 FAR1Q8WVX9 515 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 CCT6BQ92526 530 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 TLCD1Q96CP7 247 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 L3HYPDHQ96EM0 354 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 WDR34Q96EX3 536 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 PAIP2Q9BPZ3 127 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 TRMOQ9BU70 441 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 SEMA4BQ9NPR2 832 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 OXSMQ9NWU1 459 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 NMRK1Q9NWW6 199 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 SNX6Q9UNH7 406 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 APCP25054 2843 aa10.39□□□□□ -0.75
TMEM39A-211ENST00000491685 LOC102723996A0A087X1L8 192 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 A0A088AWK7 358 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 OR2W5A6NFC9 320 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 G3V2L1 256 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 BIRC5O15392 142 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 LRRTM2O43300 516 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 TYROBPO43914 113 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 LCMT2O60294 686 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 SERPINA7P05543 415 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 HEXBP07686 556 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 CYC1P08574 325 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 SBK3P0C264 359 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 EDN3P14138 238 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 ZNF10P21506 573 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 PTX3P26022 381 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 SCTRP47872 440 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 AVPR1BP47901 424 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 ST13P50502 369 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 TNFSF10P50591 281 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 CDH13P55290 713 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 PKNOX1P55347 436 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 KCNK10P57789 538 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 ARG2P78540 354 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 IFT88Q13099 833 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 SLBPQ14493 270 aaKnown RBP eCLIP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 UNC50Q53HI1 259 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 C1QL3Q5VWW1 255 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 ZNF324BQ6AW86 544 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 TMEM205Q6UW68 189 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 FAM180AQ6UWF9 173 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 ABHD13Q7L211 337 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 KIRREL3Q8IZU9 778 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 OR1N1Q8NGS0 311 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 TRPC4APQ8TEL6 797 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 FAR2Q96K12 515 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 LMF1Q96S06 567 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 TGIF2Q9GZN2 237 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 CLK4Q9HAZ1 481 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 MKKSQ9NPJ1 570 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 PFDN4Q9NQP4 134 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 PSD3Q9NYI0 1048 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 AHSPQ9NZD4 102 aa10.38□□□□□ -0.75
TMEM39A-211ENST00000491685 HCN3Q9P1Z3 774 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms