RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 NUDT8Q8WV74 236 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 AICDAQ9GZX7 198 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 PLEKHF2Q9H8W4 249 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 ADAP2Q9NPF8 381 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 TUBA8Q9NY65 449 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 TRMT6Q9UJA5 497 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 CAPN6Q9Y6Q1 641 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 STAB1Q9NY15 2570 aa12.62□□□□□ -0.39
CTDSP1-210ENST00000491064 NINQ8N4C6 2090 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 ZANQ9Y493 2812 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 TRGV5A0A0B4J1U4 118 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 ZCWPW2A0A1B0GU75 182 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 HCN1O60741 890 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 LY6G6DO95868 133 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 BMP5P22003 454 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 RGS4P49798 205 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 HNRNPFP52597 415 aaKnown RBP12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 HK2P52789 917 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 HSD17B7P56937 341 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 DCAF7P61962 342 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 REEP5Q00765 189 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 CSHL1Q14406 222 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 CCNG2Q16589 344 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 FBXW10Q5XX13 1052 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 DUPD1Q68J44 220 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 DRICH1Q6PGQ1 229 aaPredicted RBP12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 HSDL2Q6YN16 418 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 FAM47EQ6ZV65 393 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 PALM2Q8IXS6 379 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 GOLM1Q8NBJ4 401 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 NAXEQ8NCW5 288 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 TMEM52Q8NDY8 209 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 TRPV3Q8NET8 790 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 SLC5A11Q8WWX8 675 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 SREK1Q8WXA9 508 aaKnown RBP12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 NEIL2Q969S2 332 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 LRRC46Q96FV0 321 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 REPIN1Q9BWE0 567 aaKnown RBP12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 EXO5Q9H790 373 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 SEMA4BQ9NPR2 832 aaPredicted RBP12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 PRTFDC1Q9NRG1 225 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 SACM1LQ9NTJ5 587 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 PCDHGB3Q9Y5G1 929 aa12.61□□□□□ -0.39
CTDSP1-210ENST00000491064 FBN1P35555 2871 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 KIAA1549Q9HCM3 1950 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 FAM171A2A8MVW0 826 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 DVL2O14641 736 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 ZNF354AO60765 605 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 HAUS5O94927 633 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 SERPINA6P08185 405 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 HIST1H2AGP0C0S8 130 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 CCL3P10147 92 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 EPXP11678 715 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 HIST1H2ADP20671 130 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TERF1P54274 439 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 KIF5AQ12840 1032 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 RUNX2Q13950 521 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 ELAVL1Q15717 326 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 BBS9Q3SYG4 887 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TOR1AIP1Q5JTV8 583 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 SHEQ5VZ18 495 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 POMZP3Q6PJE2 187 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 GSTA5Q7RTV2 222 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 CAND1Q86VP6 1230 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 ULK2Q8IYT8 1036 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TMEM132CQ8N3T6 1108 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 FBXW8Q8N3Y1 598 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 HIST1H2AHQ96KK5 128 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 SGCZQ96LD1 299 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TSNARE1Q96NA8 513 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 HIST1H2AJQ99878 128 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 H2AFJQ9BTM1 129 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TRIM5Q9C035 493 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TRMT1Q9NXH9 659 aaKnown RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 FOXD3Q9UJU5 478 aaPredicted RBP12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 ATG4BQ9Y4P1 393 aa12.6□□□□□ -0.39
CTDSP1-210ENST00000491064 TUBAL3A6NHL2 446 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 P04436 131 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 CD53P19397 219 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 CEACAM8P31997 349 aaPredicted RBP12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 BTN3A2P78410 334 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 NKX6-1P78426 367 aaPredicted RBP12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 CCZ1BP86790 482 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 CCZ1P86791 482 aaPredicted RBP12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 SLC13A2Q13183 592 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 BMPR2Q13873 1038 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 PCBP2Q15366 365 aaKnown RBP eCLIP12.59□□□□□ -0.392e-6■■■□□ 18.5
CTDSP1-210ENST00000491064 UGT3A1Q6NUS8 523 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 PAQR3Q6TCH7 311 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 CXXC5Q7LFL8 322 aaKnown RBP12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 LMNTD2Q8IXW0 634 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 TNIP2Q8NFZ5 429 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 SPATA3Q8NHX4 192 aa12.59□□□□□ -0.39
CTDSP1-210ENST00000491064 NANOS1Q8WY41 292 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms