RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 LRRC70Q7Z2Q7 622 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 FRG2BQ96QU4 278 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 DUSP26Q9BV47 211 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 SLC25A19Q9HC21 320 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 MAT2BQ9NZL9 334 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 SH3BP4Q9P0V3 963 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 ENOPH1Q9UHY7 261 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 COL4A6Q14031 1691 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 LEUTXA8MZ59 168 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 H3BNC9 293 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 LGI1O95970 557 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 ALPIP09923 528 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 PPIBP23284 216 aaKnown RBP18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 MADCAM1Q13477 382 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 DGKKQ5KSL6 1271 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 LCN1P1Q5VSP4 162 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 LAMTOR1Q6IAA8 161 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 L3MBTL4Q8NA19 623 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 BHMTQ93088 406 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 FUBP3Q96I24 572 aaKnown RBP eCLIP18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 IL4I1Q96RQ9 567 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 GTPBP2Q9BX10 602 aaKnown RBP18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 NARFLQ9H6Q4 476 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 PLEKHB1Q9UF11 243 aaPredicted RBP18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 AFF4Q9UHB7 1163 aaKnown RBP18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 HSPB11Q9Y547 144 aa18.52■□□□□ 0.55
SNAPC3-206ENST00000490969 TPST2O60704 377 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 POU1F1P28069 291 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 CRISP1P54107 249 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 CDH4P55283 916 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 NFATC2Q13469 925 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 KLHL17Q6TDP4 642 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 GLCCI1Q86VQ1 547 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 AMIGO1Q86WK6 493 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 AQP11Q8NBQ7 271 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 TCF25Q9BQ70 676 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 RACGAP1Q9H0H5 632 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 CCSER2Q9H7U1 834 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 THSD1Q9NS62 852 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 ACER3Q9NUN7 267 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 ING3Q9NXR8 418 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 PLD2O14939 933 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 HBQ1P09105 142 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 CLEC2LP0C7M8 214 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 SRCP12931 536 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 ZNF30P17039 623 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 MAP2K3P46734 347 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 TUFMP49411 452 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 DDI2Q5TDH0 399 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 FRMPD2BQ6IN97 320 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 NCEH1Q6PIU2 408 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 LAS2Q8IYD9 372 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 FAM46DQ8NEK8 389 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 KIAA1143Q96AT1 154 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 TMEM80Q96HE8 168 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 TOX2Q96NM4 488 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 TRAF4Q9BUZ4 470 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 MND1Q9BWT6 205 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 HDHD5Q9BXW7 423 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 POLR2J2Q9GZM3 115 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 FZD3Q9NPG1 666 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 CHD7Q9P2D1 2997 aa18.51■□□□□ 0.55
SNAPC3-206ENST00000490969 TEX28O15482 410 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 PRAMEF4O60810 478 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 IL1AP01583 271 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 TRBC1P01850 177 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 PSKH1P11801 424 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 DGKEP52429 567 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 DEFB103AP81534 67 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 FOXD4Q12950 439 aaPredicted RBP18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 CYP27C1Q4G0S4 372 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 PRAMEF9Q5VWM5 478 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 LIPKQ5VXJ0 399 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 GLRX5Q86SX6 157 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 TMC8Q8IU68 726 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 CLDN22Q8N7P3 220 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 LSMEM1Q8N8F7 131 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 OR9Q1Q8NGQ5 310 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 KLHL6Q8WZ60 621 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 TRIM43Q96BQ3 446 aaPredicted RBP18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 NDRG2Q9UN36 371 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 AP2A2O94973 939 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 RHOCP08134 193 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 MSL3P1P0C860 447 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 CSF2RAP15509 400 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 ITGALP20701 1170 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 ACRV1P26436 265 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 LIMS1P48059 325 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 LINGO4Q6UY18 593 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 MACC1Q6ZN28 852 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 PHC2Q8IXK0 858 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 ADGRG2Q8IZP9 1017 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 DNAJC5GQ8N7S2 189 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 PIH1D2Q8WWB5 315 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 PIP5K1AQ99755 562 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 C11orf16Q9NQ32 467 aa18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 TXNL4BQ9NX01 149 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-206ENST00000490969 SMLR1H3BR10 107 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 SYN3O14994 580 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms