RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TNPO3Q9Y5L0 923 aaKnown RBP18.49■□□□□ 0.55
SMC4-222ENST00000490207 HIVEP3Q5T1R4 2406 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 TGFBR3LH3BV60 316 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 RTCAO00442 366 aaKnown RBP18.48■□□□□ 0.55
SMC4-222ENST00000490207 MYO1DO94832 1006 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 SIX3O95343 332 aaPredicted RBP18.48■□□□□ 0.55
SMC4-222ENST00000490207 TGFB1P01137 390 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 RBP1P09455 135 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 RHOXF2BP0C7M4 288 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 SSR2P43308 183 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 PHEXP78562 749 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 TERF2Q15554 542 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 TMEM35AQ53FP2 167 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 ZNF766Q5HY98 468 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 LIPJQ5W064 366 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 CHSY3Q70JA7 882 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 UBE3DQ7Z6J8 389 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 CLNKQ7Z7G1 428 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 NFAM1Q8NET5 270 aaPredicted RBP18.48■□□□□ 0.55
SMC4-222ENST00000490207 RHOXF2Q9BQY4 288 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 CDCP1Q9H5V8 836 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 LYRM4Q9HD34 91 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 DMRT3Q9NQL9 472 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 TMCO1Q9UM00 188 aa18.48■□□□□ 0.55
SMC4-222ENST00000490207 SYNDIG1LA6NDD5 238 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 CYR61O00622 381 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 UGDHO60701 494 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 SCELO95171 688 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 RASAL1O95294 804 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 COL6A2P12110 1019 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 ATP5A1P25705 553 aaKnown RBP18.47■□□□□ 0.55
SMC4-222ENST00000490207 EEF1DP29692 281 aaKnown RBP18.47■□□□□ 0.55
SMC4-222ENST00000490207 ST13P50502 369 aaKnown RBP18.47■□□□□ 0.55
SMC4-222ENST00000490207 RAP1GDS1P52306 607 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 OR1C1Q15619 314 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 AP5B1Q2VPB7 878 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 KHDRBS2Q5VWX1 349 aaKnown RBP18.47■□□□□ 0.55
SMC4-222ENST00000490207 METTL2BQ6P1Q9 378 aaKnown RBP18.47■□□□□ 0.55
SMC4-222ENST00000490207 TRMT10CQ7L0Y3 403 aaKnown RBP18.47■□□□□ 0.55
SMC4-222ENST00000490207 RPS19BP1Q86WX3 136 aaKnown RBP18.47■□□□□ 0.55
SMC4-222ENST00000490207 RNF175Q8N4F7 328 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 ACOT4Q8N9L9 421 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 MDS2Q8NDY4 140 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 B3GNT7Q8NFL0 401 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 HUS1BQ8NHY5 278 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 NR4A3Q92570 626 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 REPS1Q96D71 796 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 SIGLEC12Q96PQ1 595 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 MAPKAP1Q9BPZ7 522 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 OR51B5Q9H339 312 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 IPPKQ9H8X2 491 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 ADAP2Q9NPF8 381 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 ANKRD10Q9NXR5 420 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 TSC22D4Q9Y3Q8 395 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 PCDHGA11Q9Y5H2 935 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 CLDN16Q9Y5I7 305 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 SPACA6W5XKT8 324 aa18.47■□□□□ 0.55
SMC4-222ENST00000490207 TRBV11-1A0A0K0K1C0 115 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 SAP18O00422 153 aaKnown RBP18.46■□□□□ 0.55
SMC4-222ENST00000490207 RIPK2O43353 540 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 SMIM24O75264 130 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 SNRPAP09012 282 aaKnown RBP18.46■□□□□ 0.55
SMC4-222ENST00000490207 HIST1H1TP22492 207 aaPredicted RBP18.46■□□□□ 0.55
SMC4-222ENST00000490207 PPP2R1BP30154 601 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 PIK3CBP42338 1070 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 TDGF1P3P51864 188 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 ZNF324BQ6AW86 544 aaPredicted RBP18.46■□□□□ 0.55
SMC4-222ENST00000490207 PHF21BQ96EK2 531 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 C5orf34Q96MH7 638 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 PSMG3-AS1Q96PY0 264 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 MTERF1Q99551 399 aaKnown RBP18.46■□□□□ 0.55
SMC4-222ENST00000490207 CENPKQ9BS16 269 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 DEFB126Q9BYW3 111 aa18.46■□□□□ 0.55
SMC4-222ENST00000490207 ERRFI1Q9UJM3 462 aaPredicted RBP18.46■□□□□ 0.55
SMC4-222ENST00000490207 H0YIV9 168 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 STX16-NPEPL1H3BU86 382 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 STX16O14662 325 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 CRYABP02511 175 aaKnown RBP18.45■□□□□ 0.54
SMC4-222ENST00000490207 RNF224P0DH78 156 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 TPP2P29144 1249 aaPredicted RBP18.45■□□□□ 0.54
SMC4-222ENST00000490207 CD96P40200 585 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 ARL1P40616 181 aaPredicted RBP18.45■□□□□ 0.54
SMC4-222ENST00000490207 CLCN2P51788 898 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 RPS13P62277 151 aaKnown RBP18.45■□□□□ 0.54
SMC4-222ENST00000490207 PMP22Q01453 160 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 OC90Q02509 493 aaPredicted RBP18.45■□□□□ 0.54
SMC4-222ENST00000490207 CPSF6Q16630 551 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMC4-222ENST00000490207 DEPDC1Q5TB30 811 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 LGSNQ5TDP6 509 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 APCDD1LQ8NCL9 501 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 NCLNQ969V3 563 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 VMP1Q96GC9 406 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 MRPL57Q9BQC6 102 aaKnown RBP18.45■□□□□ 0.54
SMC4-222ENST00000490207 SORBS1Q9BX66 1292 aaKnown RBP18.45■□□□□ 0.54
SMC4-222ENST00000490207 KCMF1Q9P0J7 381 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 FBXW2Q9UKT8 454 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 SLC5A6Q9Y289 635 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 PCDHGB6Q9Y5F9 930 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 SVILO95425 2214 aa18.45■□□□□ 0.54
SMC4-222ENST00000490207 ZGRF1Q86YA3 2104 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms