RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ANKRD31Q8N7Z5 1873 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 IGHV4-28A0A0C4DH34 117 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 LRRIQ4A6NIV6 560 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SPINT2O43291 252 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PRKAB2O43741 272 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 UPK3AO75631 287 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RAD51DO75771 328 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PDE9AO76083 593 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 APOHP02749 345 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CYP1A1P04798 512 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ASNSP08243 561 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 HAPLN1P10915 354 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RALAP11233 206 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TMOD1P28289 359 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 AKT2P31751 481 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 VAMP7P51809 220 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 HADHBP55084 474 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 ATP5IP56385 69 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 GNG11P61952 73 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SULT2A1Q06520 285 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 HSPA14Q0VDF9 509 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CASP8Q14790 479 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 FCRLBQ6BAA4 426 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 OR6B2Q6IFH4 312 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM220Q6QAJ8 160 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 Q6ZNX1 250 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 COX8CQ7Z4L0 72 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM173Q86WV6 379 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PSTKQ8IV42 348 aaKnown RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NKAIN4Q8IVV8 208 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC65Q8IXS2 484 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PARP16Q8N5Y8 322 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PPFIBP2Q8ND30 876 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 DNAAF1Q8NEP3 725 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SSMEM1Q8WWF3 244 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 SLC44A1Q8WWI5 657 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CTNNBL1Q8WYA6 563 aaPredicted RBP2.72□□□□□ -1.97
UBXN4-208ENST00000490163 RAB40CQ96S21 281 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 OMDQ99983 421 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 NACA2Q9H009 215 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 AUNIPQ9H7T9 357 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 KLHL9Q9P2J3 617 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 KLHL13Q9P2N7 655 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 MTUS1Q9ULD2 1270 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 CDC14AQ9UNH5 594 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 MGAT4BQ9UQ53 548 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TNNQ9UQP3 1299 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 PADI2Q9Y2J8 665 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 USP16Q9Y5T5 823 aa2.72□□□□□ -1.97
UBXN4-208ENST00000490163 TRBV5-5A0A0J9YX44 114 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CTDSPLO15194 276 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 MAGEB2O15479 319 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 B3GAT3O94766 335 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF202O95125 648 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 HPRP00739 348 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 KRT14P02533 472 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 MT-ND1P03886 318 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 GHRP10912 638 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF24P17028 368 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PI3P19957 117 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 TNFRSF1BP20333 461 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PPP2R1AP30153 589 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CTNNB1P35222 781 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 GRIA1P42261 906 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CEBPDP49716 269 aaPredicted RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 GNGT1P63211 74 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 DRP2Q13474 957 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PTPAQ15257 358 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 STK11Q15831 433 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CAMK4Q16566 473 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CTU2Q2VPK5 515 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 TDRD12Q587J7 1177 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 LRRC8EQ6NSJ5 796 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 BZW1Q7L1Q6 419 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 UEVLDQ8IX04 471 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 BHLHE23Q8NDY6 225 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 STKLD1Q8NE28 680 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 C8orf46Q8TAG6 207 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 OTULINQ96BN8 352 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 MOAP1Q96BY2 351 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 RBM41Q96IZ5 413 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SPATA13Q96N96 652 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 S1PR3Q99500 378 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SGPP1Q9BX95 441 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CAPS2Q9BXY5 557 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 NIPAL2Q9H841 368 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 SLC40A1Q9NP59 571 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 TBC1D7Q9P0N9 293 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 STK39Q9UEW8 545 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF639Q9UID6 485 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 FBXL4Q9UKA2 621 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PAIP2BQ9ULR5 123 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 MRPL11Q9Y3B7 192 aaKnown RBP2.71□□□□□ -1.98
UBXN4-208ENST00000490163 MAST2Q6P0Q8 1798 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 RGS12O14924 1447 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 H0YCG3 227 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 CCSO14618 274 aa2.71□□□□□ -1.98
UBXN4-208ENST00000490163 PPIP5K2O43314 1243 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms