RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ATP6V1G1O75348 118 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 GMNNO75496 209 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 ATP6AP2O75787 350 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 NEBLO76041 1014 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SLITRK3O94933 977 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 OR4F21O95013 312 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 NPPAP01160 153 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 CA3P07451 260 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 PABPC4LP0CB38 370 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 FGF3P11487 239 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 HNF1AP20823 631 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 S1PR1P21453 382 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 JAK1P23458 1154 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 EEF1B2P24534 225 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 ELAVL4P26378 380 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 HSD17B2P37059 387 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC1A3P43003 542 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 IER3P46695 156 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 KCNJ4P48050 445 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RGS4P49798 205 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RASSF2P50749 326 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 CCL11P51671 97 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 DSCR9P59020 149 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 CD81P60033 236 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SNRPEP62304 92 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 ABATP80404 500 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 MAP2K1Q02750 393 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 HSF2Q03933 536 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RELQ04864 619 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 TGM3Q08188 693 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RASGEF1BQ0VAM2 473 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 GPS2Q13227 327 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RCN1Q15293 331 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 EFNB3Q15768 340 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 PTGISQ16647 500 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM174BQ3ZCQ3 159 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 TAF3Q5VWG9 929 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 LIPKQ5VXJ0 399 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 PLXDC2Q6UX71 529 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 LUZP1Q86V48 1076 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 MEX3DQ86XN8 651 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 OFCC1Q8IZS5 231 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC25A41Q8N5S1 370 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 BHLHE23Q8NDY6 225 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 LMO3Q8TAP4 145 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC44A1Q8WWI5 657 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 MOB3AQ96BX8 217 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 MOAP1Q96BY2 351 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 MRPL53Q96EL3 112 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 IGSF21Q96ID5 467 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RAB40CQ96S21 281 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 CCT7Q99832 543 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SPAG8Q99932 426 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 WDR77Q9BQA1 342 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM213AQ9BRX8 229 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 DCLK3Q9C098 648 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 GLT8D2Q9H1C3 349 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SEMA6AQ9H2E6 1030 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SNX25Q9H3E2 840 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 KCNK13Q9HB14 408 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 CDH20Q9HBT6 801 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 PNRC2Q9NPJ4 139 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 PPANQ9NQ55 473 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM114A2Q9NRY5 505 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 BARHL2Q9NY43 387 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 NPAP1Q9NZP6 1156 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 WNT16Q9UBV4 365 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 COPS7AQ9UBW8 275 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 ACSL5Q9ULC5 683 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 WDR83OSQ9Y284 106 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RAP2CQ9Y3L5 183 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 COL22A1Q8NFW1 1626 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 USP6P35125 1406 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 A0A1W2PP64 1363 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 CRYBG1Q9Y4K1 1723 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 KIF7Q2M1P5 1343 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SHPRHQ149N8 1683 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ARHGEF35A5YM69 484 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 HELTA6NFD8 242 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 STMND1H3BQB6 276 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 I6L893 689 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 TBX19O60806 448 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 UFL1O94874 794 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 LCKP06239 509 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 YES1P07947 543 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SP9P0CG40 484 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ARSBP15848 533 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 GOT1P17174 413 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 MAOAP21397 527 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 CD9P21926 228 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 UQCRC2P22695 453 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 GJB2P29033 226 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 HLA-FP30511 346 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 HOXC9P31274 260 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 FCGR2BP31994 310 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 VCPP55072 806 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SELENOVP59797 346 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 MAT1AQ00266 395 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 CRYZQ08257 329 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms