RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 PRR22Q8IZ63 422 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 APCDD1Q8J025 514 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 OR6T1Q8NGN1 323 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 NCOA7Q8NI08 942 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 AFAP1L1Q8TED9 768 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 RCHY1Q96PM5 261 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 GBP5Q96PP8 586 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 TEX13BQ9BXU2 312 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 OR10A4Q9H209 315 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 UBQLN3Q9H347 655 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 UBE2TQ9NPD8 197 aaPredicted RBP2.39□□□□□ -2.03
NF1-213ENST00000489712 PFDN4Q9NQP4 134 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 KLK4Q9Y5K2 254 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 GON4LQ3T8J9 2241 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 POGZQ7Z3K3 1410 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 SALL1Q9NSC2 1324 aa2.39□□□□□ -2.03
NF1-213ENST00000489712 TRBV5-4A0A0C4DH59 114 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 TEX48A0A1B0GUV7 120 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 FOXI3A8MTJ6 420 aaPredicted RBP2.38□□□□□ -2.03
NF1-213ENST00000489712 ZNF253O75346 499 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 BAG2O95816 211 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 CCDC175P0C221 793 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 SCG2P13521 617 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 CALRP27797 417 aaKnown RBP2.38□□□□□ -2.03
NF1-213ENST00000489712 OAS2P29728 719 aaKnown RBP2.38□□□□□ -2.03
NF1-213ENST00000489712 TNK1Q13470 666 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 CAMK2DQ13557 499 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 TTC31Q49AM3 519 aaPredicted RBP2.38□□□□□ -2.03
NF1-213ENST00000489712 SLC22A6Q4U2R8 563 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 RPUSD3Q6P087 351 aaKnown RBP2.38□□□□□ -2.03
NF1-213ENST00000489712 SLC27A4Q6P1M0 643 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 ARMCX5Q6P1M9 558 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
NF1-213ENST00000489712 CCDC91Q7Z6B0 441 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 PHLDB2Q86SQ0 1253 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 SNX32Q86XE0 403 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 CHCHD4Q8N4Q1 142 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 IQUBQ8NA54 791 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 LIPHQ8WWY8 451 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 RAD54LQ92698 747 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 TSSK2Q96PF2 358 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 NAA11Q9BSU3 229 aaPredicted RBP2.38□□□□□ -2.03
NF1-213ENST00000489712 EDEM3Q9BZQ6 932 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 TRIM7Q9C029 511 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 LIME1Q9H400 295 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 C5orf66Q9H5L9 145 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 ANAPC5Q9UJX4 755 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 IKZF3Q9UKT9 509 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 NIP7Q9Y221 180 aaKnown RBP eCLIP2.38□□□□□ -2.03
NF1-213ENST00000489712 SLC6A5Q9Y345 797 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 FER1L5A0AVI2 2057 aa2.38□□□□□ -2.03
NF1-213ENST00000489712 ATRXP46100 2492 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 BICDL2A1A5D9 508 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 A8MXE2 369 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 TMCO5BA8MYB1 307 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 PPIP5K2O43314 1243 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 FGF19O95750 216 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 MOCS2O96007 188 aaPredicted RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 SP9P0CG40 484 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 GLULP15104 373 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 MGMTP16455 207 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 TNNT3P45378 269 aaPredicted RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 PPP5CP53041 499 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 BACE1P56817 501 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 RPP38P78345 283 aaKnown RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 SCARB2Q14108 478 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 CCL14Q16627 93 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 PCK2Q16822 640 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 CCDC92Q53HC0 331 aaPredicted RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 C6orf136Q5SQH8 315 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 REP15Q6BDI9 236 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 KLHL10Q6JEL2 608 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 PET117Q6UWS5 81 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 PAMR1Q6UXH9 720 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 FAM47EQ6ZV65 393 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 ERN2Q76MJ5 926 aaKnown RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 ADCK2Q7Z695 626 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 DNAJB7Q7Z6W7 309 aaPredicted RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 SLFN11Q7Z7L1 901 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 CREBRFQ8IUR6 639 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 TBC1D10CQ8IV04 446 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 THNSL1Q8IYQ7 743 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 CCAR2Q8N163 923 aaKnown RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 ELMOD1Q8N336 334 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 SLC43A2Q8N370 569 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 TMCO5AQ8N6Q1 288 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 MSANTD4Q8NCY6 345 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 BEST4Q8NFU0 473 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 PCNPQ8WW12 178 aaKnown RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 PHYHIPLQ96FC7 376 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 JAKMIP1Q96N16 626 aaKnown RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 RAB3IPQ96QF0 476 aaPredicted RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 HSD17B14Q9BPX1 270 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 PDFQ9HBH1 243 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 PDRG1Q9NUG6 133 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 DHRS4-AS1Q9P1J3 65 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 RSPH14Q9UHP6 348 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 NOCTQ9UK39 431 aaKnown RBP2.37□□□□□ -2.03
NF1-213ENST00000489712 RPGRIP1LQ68CZ1 1315 aa2.37□□□□□ -2.03
NF1-213ENST00000489712 FAM205AQ6ZU69 1335 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms