RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 L3MBTL1Q9Y468 752 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 NEUROG3Q9Y4Z2 214 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 ZNF318Q5VUA4 2279 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 GOLGA4Q13439 2230 aaKnown RBP20.52■□□□□ 0.88
SMC4-221ENST00000489573 NME4O00746 187 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 CASC3O15234 703 aaKnown RBP20.52■□□□□ 0.88
SMC4-221ENST00000489573 B3GALT2O43825 422 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 SORBS2O94875 1100 aaKnown RBP20.52■□□□□ 0.88
SMC4-221ENST00000489573 CTSBP07858 339 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 SEPHS1P49903 392 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 MUM1Q2TAK8 710 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 TMEM71Q6P5X7 295 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 MSRB3Q8IXL7 192 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 CLECL1Q8IZS7 167 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 RNF148Q8N7C7 305 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 FAM47BQ8NA70 645 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 OR8J3Q8NGG0 315 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 N4BP2L2Q92802 583 aaPredicted RBP20.52■□□□□ 0.88
SMC4-221ENST00000489573 ANKRD27Q96NW4 1050 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 PANX1Q96RD7 426 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 LRRN3Q9H3W5 708 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 DENND2DQ9H6A0 471 aaPredicted RBP20.52■□□□□ 0.88
SMC4-221ENST00000489573 SLC25A37Q9NYZ2 338 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 EHD3Q9NZN3 535 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 ATG4BQ9Y4P1 393 aa20.52■□□□□ 0.88
SMC4-221ENST00000489573 USP34Q70CQ2 3546 aa20.52■□□□□ 0.87
SMC4-221ENST00000489573 TRBV5-3A0A0A0MS03 114 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 A0A1W2PQM1 296 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 TOX3O15405 576 aaPredicted RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 ANP32DO95626 131 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 CPNE6O95741 557 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 HOXB9P17482 250 aaPredicted RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 PTPN6P29350 595 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 PLA2G5P39877 138 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 CDKN2CP42773 168 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 PRSS53Q2L4Q9 553 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 MPEG1Q2M385 716 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 GTDC1Q4AE62 458 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 RABL3Q5HYI8 236 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 TCTE1Q5JU00 501 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 C1orf146Q5VVC0 180 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 CYB5D1Q6P9G0 228 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 D2HGDHQ8N465 521 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 ARHGEF39Q8N4T4 335 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 NATD1Q8N6N6 113 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 WDR60Q8WVS4 1066 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 KLHL6Q8WZ60 621 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 CIDECQ96AQ7 238 aaPredicted RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 FAM122AQ96E09 287 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 SLC41A2Q96JW4 573 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 GBP5Q96PP8 586 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 MAPKAP1Q9BPZ7 522 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 TRIM8Q9BZR9 551 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 CD300AQ9UGN4 299 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 PHF11Q9UIL8 331 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 ATXN7L1Q9ULK2 861 aaPredicted RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 PCDHB14Q9Y5E9 798 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 A0A1W2PR48 441 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 PRORSD1PA6NEY8 169 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 CPSF4O95639 269 aaKnown RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 AIFM1O95831 613 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 IL1RNP18510 177 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 EFNA1P20827 205 aaPredicted RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 DNAH14Q0VDD8 3507 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 KPNB1Q14974 876 aaKnown RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 NDUFA9Q16795 377 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 SPATS1Q496A3 300 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 RUNDC3AQ59EK9 446 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 DBX2Q6ZNG2 339 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 SUMF1Q8NBK3 374 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 DPYSL5Q9BPU6 564 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 ZNF768Q9H5H4 540 aaKnown RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 SLC6A13Q9NSD5 602 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 IRAK4Q9NWZ3 460 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 SUCOQ9UBS9 1254 aaKnown RBP20.51■□□□□ 0.87
SMC4-221ENST00000489573 POMPQ9Y244 141 aa20.51■□□□□ 0.87
SMC4-221ENST00000489573 C1orf226A1L170 272 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 A8MU76 341 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 FLRT2O43155 660 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 PROM1O43490 865 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 GALR3O60755 368 aaPredicted RBP20.5■□□□□ 0.87
SMC4-221ENST00000489573 GSNP06396 782 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 ZNF806P0C7X5 589 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 EEFSECP57772 596 aaKnown RBP20.5■□□□□ 0.87
SMC4-221ENST00000489573 MTPNP58546 118 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 KCNAB1Q14722 419 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 TMTC4Q5T4D3 741 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 PRR23CQ6ZRP0 262 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 PRSS41Q7RTY9 318 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 PDSS2Q86YH6 399 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 OR4D9Q8NGE8 314 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 OR4A15Q8NGL6 344 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 CNDP2Q96KP4 475 aaKnown RBP20.5■□□□□ 0.87
SMC4-221ENST00000489573 SH3GL1Q99961 368 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 SYNDIG1Q9H7V2 258 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 ANKHQ9HCJ1 492 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 TAS2R7Q9NYW3 318 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 NAALAD2Q9Y3Q0 740 aa20.5■□□□□ 0.87
SMC4-221ENST00000489573 ZNF860A6NHJ4 632 aa20.49■□□□□ 0.87
SMC4-221ENST00000489573 NVLO15381 856 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms