RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 L2HGDHQ9H9P8 463 aa17.8■□□□□ 0.44
MRPL55-230ENST00000489430 MS4A12Q9NXJ0 267 aa17.8■□□□□ 0.44
MRPL55-230ENST00000489430 KCMF1Q9P0J7 381 aa17.8■□□□□ 0.44
MRPL55-230ENST00000489430 CPSF2Q9P2I0 782 aaKnown RBP17.8■□□□□ 0.44
MRPL55-230ENST00000489430 XPR1Q9UBH6 696 aa17.8■□□□□ 0.44
MRPL55-230ENST00000489430 NTNG1Q9Y2I2 539 aa17.8■□□□□ 0.44
MRPL55-230ENST00000489430 SCN3AQ9NY46 2000 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 A0A0G2JN53 185 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 ANKUB1A6NFN9 424 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 FOXE1O00358 373 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-230ENST00000489430 RHOXF2BP0C7M4 288 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 PCNAP12004 261 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 ATP5A1P25705 553 aaKnown RBP17.79■□□□□ 0.44
MRPL55-230ENST00000489430 PTX3P26022 381 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-230ENST00000489430 CERS1P27544 350 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 SLC13A2Q13183 592 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 ELOAQ14241 798 aaKnown RBP17.79■□□□□ 0.44
MRPL55-230ENST00000489430 GOLGA7Q7Z5G4 137 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 CRLF3Q8IUI8 442 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 CYP4X1Q8N118 509 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 HORMAD2Q8N7B1 307 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 PTGR2Q8N8N7 351 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-230ENST00000489430 B3GNT7Q8NFL0 401 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 DNAJB8Q8NHS0 232 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 RGMAQ96B86 450 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 MAGEB10Q96LZ2 347 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-230ENST00000489430 SLX1AQ9BQ83 275 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 RHOXF2Q9BQY4 288 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 UTP23Q9BRU9 249 aaKnown RBP17.79■□□□□ 0.44
MRPL55-230ENST00000489430 NTMT1Q9BV86 223 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 ADAP2Q9NPF8 381 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 DMRT3Q9NQL9 472 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 CLDN16Q9Y5I7 305 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 SHANK1Q9Y566 2161 aa17.79■□□□□ 0.44
MRPL55-230ENST00000489430 CLDN9O95484 217 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 TGFB1P01137 390 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 BIKQ13323 160 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 MRPL49Q13405 166 aaKnown RBP17.78■□□□□ 0.44
MRPL55-230ENST00000489430 CUL3Q13618 768 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 SERTAD2Q14140 314 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 RPS19BP1Q86WX3 136 aaKnown RBP17.78■□□□□ 0.44
MRPL55-230ENST00000489430 MYLK4Q86YV6 388 aaPredicted RBP17.78■□□□□ 0.44
MRPL55-230ENST00000489430 BEST3Q8N1M1 668 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 ZCCHC7Q8N3Z6 543 aaKnown RBP17.78■□□□□ 0.44
MRPL55-230ENST00000489430 UHMK1Q8TAS1 419 aaKnown RBP17.78■□□□□ 0.44
MRPL55-230ENST00000489430 SCYL1Q96KG9 808 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 CCDC77Q9BR77 488 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 C1QTNF3Q9BXJ4 246 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 ZNF358Q9NW07 568 aa17.78■□□□□ 0.44
MRPL55-230ENST00000489430 IQANK1A0A1B0GTG1 560 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 SIX3O95343 332 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 CRYABP02511 175 aaKnown RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 GCAP28676 217 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 EEF1DP29692 281 aaKnown RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 SSR2P43308 183 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 CLCN2P51788 898 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 TUBA3CQ13748 450 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 SLC29A2Q14542 456 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 ELAVL1Q15717 326 aaKnown RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 ZNF324BQ6AW86 544 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 OR4C11Q6IEV9 310 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 TUBA3EQ6PEY2 450 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 ZNF793Q6ZN11 406 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 TMEM132CQ8N3T6 1108 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 FAM47BQ8NA70 645 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 APCDD1LQ8NCL9 501 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 ACMSDQ8TDX5 336 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 DAZLQ92904 295 aaKnown RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 PHF21BQ96EK2 531 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 NPAS2Q99743 824 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 TRIM45Q9H8W5 580 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 PPCSQ9HAB8 311 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 PRM3Q9NNZ6 103 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 OLAHQ9NV23 265 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 VTI1BQ9UEU0 232 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 PCTPQ9UKL6 214 aa17.77■□□□□ 0.44
MRPL55-230ENST00000489430 SETXQ7Z333 2677 aaKnown RBP17.77■□□□□ 0.44
MRPL55-230ENST00000489430 MYO1DO94832 1006 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 AGFG2O95081 481 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 RASAL1O95294 804 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 DDAH2O95865 285 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 TRHRP34981 398 aaPredicted RBP17.76■□□□□ 0.43
MRPL55-230ENST00000489430 CCNG1P51959 295 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 RAP1GDS1P52306 607 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 MLF1P58340 268 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 CPSF6Q16630 551 aaKnown RBP eCLIP17.76■□□□□ 0.43
MRPL55-230ENST00000489430 EIF2S3LQ2VIR3 472 aaKnown RBP17.76■□□□□ 0.43
MRPL55-230ENST00000489430 GGTA1PQ4G0N0 100 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 FCRLBQ6BAA4 426 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 TMEM151AQ8N4L1 468 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 MDS2Q8NDY4 140 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 TMEM52Q8NDY8 209 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 WDR20Q8TBZ3 569 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 NR4A3Q92570 626 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 ATP6V1E2Q96A05 226 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 VMP1Q96GC9 406 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 CSF3RQ99062 836 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 MTERF1Q99551 399 aaKnown RBP17.76■□□□□ 0.43
MRPL55-230ENST00000489430 DEFB126Q9BYW3 111 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 OR51B5Q9H339 312 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms