RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PCDHGA9Q9Y5G4 932 aaKnown RBP17.55■□□□□ 0.4
PTCD3-217ENST00000488801 SAP18O00422 153 aaKnown RBP17.54■□□□□ 0.4
PTCD3-217ENST00000488801 PEX12O00623 359 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 NPHS1O60500 1241 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 CDC123O75794 336 aaPredicted RBP17.54■□□□□ 0.4
PTCD3-217ENST00000488801 HPP00738 406 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 KRT6AP02538 564 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 KRT6BP04259 564 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 BPGMP07738 259 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 MYZAPP0CAP1 466 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 ARRB2P32121 409 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 SSR2P43308 183 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 KRT6CP48668 564 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 Q0VFX4 171 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 TBL3Q12788 808 aaKnown RBP17.54■□□□□ 0.4
PTCD3-217ENST00000488801 CSTF3Q12996 717 aaKnown RBP17.54■□□□□ 0.4
PTCD3-217ENST00000488801 KCNAB2Q13303 367 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 MINDY4Q4G0A6 757 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 ATG14Q6ZNE5 492 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 RNF165Q6ZSG1 346 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 METTL4Q8N3J2 472 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 SELENOMQ8WWX9 145 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 CNDP1Q96KN2 507 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 MAPKAP1Q9BPZ7 522 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 CENPKQ9BS16 269 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 ZNF700Q9H0M5 742 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 ADAM29Q9UKF5 820 aa17.54■□□□□ 0.4
PTCD3-217ENST00000488801 RALYQ9UKM9 306 aaKnown RBP17.54■□□□□ 0.4
PTCD3-217ENST00000488801 SPENQ96T58 3664 aaKnown RBP17.54■□□□□ 0.4
PTCD3-217ENST00000488801 TCRBV16S1A1N1A0A5B0 115 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 FAM227AF5H4B4 570 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 TGFBR3LH3BV60 316 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 MASP2O00187 686 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 EEDO75530 441 aaKnown RBP17.53■□□□□ 0.4
PTCD3-217ENST00000488801 SERPINB4P48594 390 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 RAP1GDS1P52306 607 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 SLC18A1P54219 525 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 HNRNPH2P55795 449 aaKnown RBP17.53■□□□□ 0.4
PTCD3-217ENST00000488801 ASPHQ12797 758 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 LY6DQ14210 128 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 AP5B1Q2VPB7 878 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 CFAP157Q5JU67 520 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 TTC19Q6DKK2 380 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-217ENST00000488801 ANKRD37Q7Z713 158 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 NUDT13Q86X67 352 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 METTL6Q8TCB7 284 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 C11orf24Q96F05 449 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-217ENST00000488801 VPS50Q96JG6 964 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 IMMP1LQ96LU5 166 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 STMN4Q9H169 189 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-217ENST00000488801 CENPHQ9H3R5 247 aa17.53■□□□□ 0.4
PTCD3-217ENST00000488801 TMPRSS11DO60235 418 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ZWINTO95229 277 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 TPP2P29144 1249 aaPredicted RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 HMOX2P30519 316 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 SERPINB5P36952 375 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 HSD17B7P56937 341 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 BTG2P78543 158 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 EEF1A2Q05639 463 aaKnown RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 AIMP2Q13155 320 aaKnown RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ABRAXAS2Q15018 415 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 CES4AQ5XG92 561 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 FAAH2Q6GMR7 532 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 NDUFAF7Q7L592 441 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 CPEB2Q7Z5Q1 589 aaKnown RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ZNF595Q8IYB9 648 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 FAM47BQ8NA70 645 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ZBTB9Q96C00 473 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 MTFMTQ96DP5 389 aaKnown RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 HBEGFQ99075 208 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 SH3GL2Q99962 352 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ARHGAP9Q9BRR9 750 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 MRPL1Q9BYD6 325 aaKnown RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ACPTQ9BZG2 426 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 VIPAS39Q9H9C1 493 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 NECTIN3Q9NQS3 549 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 PRDM9Q9NQV7 894 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 RIC8BQ9NVN3 520 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ARGLU1Q9NWB6 273 aaPredicted RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 C19orf25Q9UFG5 118 aaPredicted RBP17.52■□□□□ 0.4
PTCD3-217ENST00000488801 ASB4Q9Y574 426 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 TIMM22Q9Y584 194 aa17.52■□□□□ 0.4
PTCD3-217ENST00000488801 EML6Q6ZMW3 1958 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 BLACEA4D250 179 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 NPIPB8E9PQR5 432 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 PSMD12O00232 456 aaPredicted RBP17.51■□□□□ 0.39
PTCD3-217ENST00000488801 BIRC5O15392 142 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 PRMT3O60678 531 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 B4GALT2O60909 372 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 ULK1O75385 1050 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 CHRNGP07510 517 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 IGLV3-21P80748 117 aaPredicted RBP17.51■□□□□ 0.39
PTCD3-217ENST00000488801 TNFRSF17Q02223 184 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 RCN2Q14257 317 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 MFSD4BQ5TF39 518 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 AGBL2Q5U5Z8 902 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 TCTN3Q6NUS6 607 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 ZCCHC23Q6ZST2 131 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 CUZD1Q86UP6 607 aa17.51■□□□□ 0.39
PTCD3-217ENST00000488801 GALNT16Q8N428 558 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms