RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 KRBOX4Q5JUW0 171 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 DOK6Q6PKX4 331 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 FRRS1Q6ZNA5 592 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 SLC24A5Q71RS6 500 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 APOBEC3FQ8IUX4 373 aaKnown RBP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 TIGD4Q8IY51 512 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 KIF18AQ8NI77 898 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 C9orf43Q8TAL5 461 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 PIK3R3Q92569 461 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 VPS33AQ96AX1 596 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 PSMB7Q99436 277 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 GPATCH1Q9BRR8 931 aaKnown RBP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 NAA11Q9BSU3 229 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 WDR35Q9P2L0 1181 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 WIPI2Q9Y4P8 454 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 IGSF10Q6WRI0 2623 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 TEX15Q9BXT5 2789 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 DMDP11532 3685 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 COL4A1P02462 1669 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 ABCC12Q96J65 1359 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 DSPP15924 2871 aaKnown RBP3.68□□□□□ -1.82
ITGB1-214ENST00000488427 TRBV5-5A0A0J9YX44 114 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 ANXA2P2A6NMY6 339 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 E9PQ18 207 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 DIAPH2O60879 1101 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 TBX10O75333 385 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 SORBS2O94875 1100 aaKnown RBP3.68□□□□□ -1.82
ITGB1-214ENST00000488427 SLCO2B1O94956 709 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 CLDN1O95832 211 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 TAF6P49848 677 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 CLDN15P56746 228 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 DCDC1P59894 354 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 CAMK2DQ13557 499 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 RAPSNQ13702 412 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 PTGISQ16647 500 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 MOGAT2Q3SYC2 334 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 C1orf141Q5JVX7 400 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 FUT10Q6P4F1 479 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 PPP1R21Q6ZMI0 780 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 KRTAP7-1Q8IUC3 87 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 METTL4Q8N3J2 472 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 PRSS35Q8N3Z0 413 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 OR4C15Q8NGM1 316 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 SETD6Q8TBK2 473 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 AK8Q96MA6 479 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 GBP5Q96PP8 586 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 ZNF300Q96RE9 604 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-214ENST00000488427 LGMNQ99538 433 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 VGLL1Q99990 258 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 SLC2A11Q9BYW1 496 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 NACAP1Q9BZK3 213 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 TBC1D13Q9NVG8 400 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 CLIC5Q9NZA1 410 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 NIP7Q9Y221 180 aaKnown RBP eCLIP3.68□□□□□ -1.82
ITGB1-214ENST00000488427 GAKO14976 1311 aa3.68□□□□□ -1.82
ITGB1-214ENST00000488427 PLXNB2O15031 1838 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 ARAP2Q8WZ64 1704 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 TENM4Q6N022 2769 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 ASB14A6NK59 587 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 SNURFLB1AK76 121 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 SURF4O15260 269 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 TIMM44O43615 452 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 GSRP00390 522 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 YES1P07947 543 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 NKX2-1P43699 371 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 OR3A2P47893 321 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 MTCP1P56278 107 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 IRX4P78413 519 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 SRSF9Q13242 221 aaKnown RBP eCLIP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 C6orf136Q5SQH8 315 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 RPUSD3Q6P087 351 aaKnown RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 ZNF530Q6P9A1 599 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 LCLAT1Q6UWP7 414 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 SPATA21Q7Z572 469 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 GBP7Q8N8V2 638 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 GTF3AQ92664 365 aaKnown RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 PYCR2Q96C36 320 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 ZNF486Q96H40 463 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 C18orf12Q96KH6 178 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 AGAP4Q96P64 663 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 GAL3ST4Q96RP7 486 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 PIGQQ9BRB3 760 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 PYGO2Q9BRQ0 406 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 UPF3BQ9BZI7 483 aaKnown RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 GPN1Q9HCN4 374 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 NUDT4Q9NZJ9 180 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 NFKBIL1Q9UBC1 381 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-214ENST00000488427 ANGPTL3Q9Y5C1 460 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 FRYLO94915 3013 aa3.67□□□□□ -1.82
ITGB1-214ENST00000488427 FANCMQ8IYD8 2048 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 CACNA1FO60840 1977 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 A0A087WV48 116 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 A0A1W2PPK0 400 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 A0A1W2PR80 420 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 URADA6NGE7 173 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 NKX6-3A6NJ46 265 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 MPTX1A8MV57 137 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 TMEM150CB9EJG8 249 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms