RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 PCDH1Q08174 1060 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 TUBA3CQ13748 450 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 PCBP2Q15366 365 aaKnown RBP eCLIP14.83□□□□□ -0.04
GABPA-203ENST00000487266 ZNF468Q5VIY5 522 aaPredicted RBP14.83□□□□□ -0.04
GABPA-203ENST00000487266 TUBA3EQ6PEY2 450 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 FAM180AQ6UWF9 173 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 OR52B6Q8NGF0 335 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 ELP5Q8TE02 316 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 FAR1Q8WVX9 515 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 KCNC2Q96PR1 638 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 TXLNGYQ9BZA5 131 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 CDCP1Q9H5V8 836 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 IPPKQ9H8X2 491 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 DMRT3Q9NQL9 472 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 PNO1Q9NRX1 252 aaKnown RBP14.83□□□□□ -0.04
GABPA-203ENST00000487266 AGPAT4Q9NRZ5 378 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 ZNF223Q9UK11 482 aaPredicted RBP14.83□□□□□ -0.04
GABPA-203ENST00000487266 RNF11Q9Y3C5 154 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 MMACHCQ9Y4U1 282 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 ICE1Q9Y2F5 2266 aa14.83□□□□□ -0.04
GABPA-203ENST00000487266 SPTAN1Q13813 2472 aaKnown RBP14.82□□□□□ -0.04
GABPA-203ENST00000487266 GABRR3A8MPY1 467 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 PRAMEF2O60811 474 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 PRKRAO75569 313 aaKnown RBP14.82□□□□□ -0.04
GABPA-203ENST00000487266 ETHE1O95571 254 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 SBK3P0C264 359 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 SSR2P43308 183 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 NEK2P51955 445 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 RPS13P62277 151 aaKnown RBP14.82□□□□□ -0.04
GABPA-203ENST00000487266 TGM3Q08188 693 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 CPSF6Q16630 551 aaKnown RBP eCLIP14.82□□□□□ -0.04
GABPA-203ENST00000487266 MEP1AQ16819 746 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 KHDRBS2Q5VWX1 349 aaKnown RBP14.82□□□□□ -0.04
GABPA-203ENST00000487266 ACOT4Q8N9L9 421 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 APCDD1LQ8NCL9 501 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 MDS2Q8NDY4 140 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 ARMC2Q8NEN0 867 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 THAP3Q8WTV1 239 aaPredicted RBP14.82□□□□□ -0.04
GABPA-203ENST00000487266 UBE2E3Q969T4 207 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 ZNF354BQ96LW1 612 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 SLX1AQ9BQ83 275 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 NOL11Q9H8H0 719 aaKnown RBP14.82□□□□□ -0.04
GABPA-203ENST00000487266 ZBTB26Q9HCK0 441 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 KLHL1Q9NR64 748 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 OLAHQ9NV23 265 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 KCMF1Q9P0J7 381 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 ERRFI1Q9UJM3 462 aaPredicted RBP14.82□□□□□ -0.04
GABPA-203ENST00000487266 PCTPQ9UKL6 214 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 NBPF19A0A087WUL8 3843 aa14.82□□□□□ -0.04
GABPA-203ENST00000487266 TRBV11-1A0A0K0K1C0 115 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 A0A1B0GTL3 188 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 CCDC189A1A4V9 331 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 PLPP1O14494 284 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 LDB3O75112 727 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 WISP2O76076 250 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 HIST1H1TP22492 207 aaPredicted RBP14.81□□□□□ -0.04
GABPA-203ENST00000487266 TPP2P29144 1249 aaPredicted RBP14.81□□□□□ -0.04
GABPA-203ENST00000487266 HPDP32754 393 aaPredicted RBP14.81□□□□□ -0.04
GABPA-203ENST00000487266 CD96P40200 585 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 ARL1P40616 181 aaPredicted RBP14.81□□□□□ -0.04
GABPA-203ENST00000487266 HSD17B7P56937 341 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 TAS2R50P59544 299 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 OR1C1Q15619 314 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 ZNF766Q5HY98 468 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 SPINK14Q6IE38 97 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 RPUSD3Q6P087 351 aaKnown RBP14.81□□□□□ -0.04
GABPA-203ENST00000487266 TRMT10CQ7L0Y3 403 aaKnown RBP14.81□□□□□ -0.04
GABPA-203ENST00000487266 SLC5A8Q8N695 610 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 ST6GALNAC3Q8NDV1 305 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 ADAMTS18Q8TE60 1221 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 CMTM7Q96FZ5 175 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 ZNF717Q9BY31 904 aaPredicted RBP14.81□□□□□ -0.04
GABPA-203ENST00000487266 FBXW2Q9UKT8 454 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 POLEQ07864 2286 aa14.81□□□□□ -0.04
GABPA-203ENST00000487266 USP9YO00507 2555 aaPredicted RBP14.8□□□□□ -0.04
GABPA-203ENST00000487266 FOXO6A8MYZ6 492 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 H0YIV9 168 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 PRKNO60260 465 aaPredicted RBP14.8□□□□□ -0.04
GABPA-203ENST00000487266 SCELO95171 688 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 SNRPAP09012 282 aaKnown RBP14.8□□□□□ -0.04
GABPA-203ENST00000487266 RBP1P09455 135 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 TSPAN8P19075 237 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 CNTFP26441 200 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 TDGF1P3P51864 188 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 RAP1GDS1P52306 607 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 OC90Q02509 493 aaPredicted RBP14.8□□□□□ -0.04
GABPA-203ENST00000487266 TRAF3Q13114 568 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 ELOAQ14241 798 aaKnown RBP14.8□□□□□ -0.04
GABPA-203ENST00000487266 SLC29A2Q14542 456 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 ZRSR2Q15696 482 aaKnown RBP14.8□□□□□ -0.04
GABPA-203ENST00000487266 TSNAXIP1Q2TAA8 658 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 AP5B1Q2VPB7 878 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 TMEM35AQ53FP2 167 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 TEX35Q5T0J7 233 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 DEPDC1Q5TB30 811 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 LIPJQ5W064 366 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 ZNF324BQ6AW86 544 aaPredicted RBP14.8□□□□□ -0.04
GABPA-203ENST00000487266 HIST2H2BCQ6DN03 193 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 ADGRD1Q6QNK2 874 aa14.8□□□□□ -0.04
GABPA-203ENST00000487266 C16orf47Q6ZP98 133 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms