RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ACACAQ13085 2346 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 BLACEA4D250 179 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 PSMD12O00232 456 aaPredicted RBP18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 PCDH17O14917 1159 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 IGHEP01854 428 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 KLK1P06870 262 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 UMODP07911 640 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 ATXN8OSP0DMR3 200 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 WT1P19544 449 aaPredicted RBP18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 JAK1P23458 1154 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 HK2P52789 917 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 RPS18P62269 152 aaKnown RBP18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 TRA2BP62995 288 aaKnown RBP18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 KLC1Q07866 573 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 ACSM2AQ08AH3 577 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 KIAA0040Q15053 153 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 SPDYAQ5MJ70 313 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 ACSM2BQ68CK6 577 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 CYP20A1Q6UW02 462 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 GPR180Q86V85 440 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 LAPTM4BQ86VI4 370 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 CRLF3Q8IUI8 442 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 SHISA5Q8N114 240 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 PLPP5Q8NEB5 264 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 PIWIL2Q8TC59 973 aaKnown RBP18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 CNTNAP3BQ96NU0 1288 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 MAPKAP1Q9BPZ7 522 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 CNTNAP3Q9BZ76 1288 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 SOX17Q9H6I2 414 aaPredicted RBP18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 LANCL2Q9NS86 450 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 SEMA3GQ9NS98 782 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 WDR70Q9NW82 654 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 VTI1BQ9UEU0 232 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 ZMIZ1Q9ULJ6 1067 aa18.27■□□□□ 0.52
PCOLCE-208ENST00000487172 CEP295Q9C0D2 2601 aa18.27■□□□□ 0.51
PCOLCE-208ENST00000487172 NUP210LQ5VU65 1888 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 ARHGAP10A1A4S6 786 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 ZNF891A8MT65 544 aaPredicted RBP18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 CYR61O00622 381 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 LSM1O15116 133 aaKnown RBP18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 TMPRSS11DO60235 418 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 FAM58BPP0C7Q3 252 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 RAE1P78406 368 aaKnown RBP18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 BTKQ06187 659 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 ERV3-1Q14264 604 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 CCNYL2Q5T2Q4 361 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 CCDC81Q6ZN84 652 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 ZNF595Q8IYB9 648 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 ZSCAN1Q8NBB4 408 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 C19orf60Q96EN9 201 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 FCRL1Q96LA6 429 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 PPP3R2Q96LZ3 170 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 C3orf30Q96M34 536 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 LRTM1Q9HBL6 345 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 RIC8BQ9NVN3 520 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 C1orf109Q9NX04 203 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 FBXW2Q9UKT8 454 aa18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 MRPS33Q9Y291 106 aaKnown RBP18.26■□□□□ 0.51
PCOLCE-208ENST00000487172 IDSB3KWA1 339 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 HDAC3O15379 428 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 PROM1O43490 865 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 GUCY1B2O75343 617 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 SEC22BO75396 215 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 SKAP2O75563 359 aaPredicted RBP18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 JRKO75564 520 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 GBAP04062 536 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 ITPKBP27987 946 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 TIA1P31483 386 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 GSTM5P46439 218 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 EMP2P54851 167 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 HNRNPH2P55795 449 aaKnown RBP18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 NR6A1Q15406 480 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 UGT8Q16880 541 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 QSOX2Q6ZRP7 698 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 TMEM151BQ8IW70 566 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 LRRC34Q8IZ02 419 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 ADAMTS17Q8TE56 1095 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 CRB3Q9BUF7 120 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 SLCO1B3Q9NPD5 702 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 C3orf18Q9UK00 162 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 MKL2Q9ULH7 1088 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 WBP11Q9Y2W2 641 aaKnown RBP18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 TMED5Q9Y3A6 229 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 MMACHCQ9Y4U1 282 aa18.25■□□□□ 0.51
PCOLCE-208ENST00000487172 FAM227AF5H4B4 570 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 K7ENP7 123 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 CLDN4O14493 209 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 PCDH7O60245 1069 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 MYO1DO94832 1006 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 JUNP05412 331 aaKnown RBP18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 HEXBP07686 556 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 CPN2P22792 545 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 MMP11P24347 488 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 BUD31P41223 144 aaPredicted RBP18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 MAPK12P53778 367 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 HSD17B7P56937 341 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 TMPRSS3P57727 454 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 FOXL2P58012 376 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 RHAGQ02094 409 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 TNFRSF17Q02223 184 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms